Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00268 ATGAAGCAGGTGGGTGGCGGTCGTGTTGTTTCCAGGCCCACAAAGCTTTACCGTGGGGTGAGGCAGAGGCACTGGGGCAAGTGGGTGGCTGAGATCAGACTCCCCAAGAATCGCACTCGTCTTTGGCTTGGTACATTCGAAACCGCTGAAGAAGCAGCTTTGGCATACGACAACGCAGCAACAACATCGGAGTTTGAGGATGTTAAGGTGGGGATTCAGACAACATCCTCGCCCTTGTCGGATGAATATTCCTCCTCCTCCTCTTCTTCTTCTGCAGGCTCCTCTTCACCTGAATCCGATATCACTTTCTTGGATTTCTTGGATTCTTATGAAGCAATGGACAATCTTGGGTTGGACCTGGAGAAGTACCCCTCAGTGGAGATTGATTGGGCAGCTTTATCTGAGTCATCATGA 414 0.5048 MKQVGGGRVVSRPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDNAATTSEFEDVKVGIQTTSSPLSDEYSSSSSSSSAGSSSPESDITFLDFLDSYEAMDNLGLDLEKYPSVEIDWAALSESS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00268 137 CDD AP2 15 60 IPR001471 GO:0003700|GO:0006355
Viun11g00268 137 FunFam Ethylene-responsive transcription factor 2 15 69 - -
Viun11g00268 137 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Viun11g00268 137 MobiDBLite consensus disorder prediction 76 98 - -
Viun11g00268 137 Gene3D AP2/ERF domain 16 70 IPR036955 GO:0003700|GO:0006355
Viun11g00268 137 SUPERFAMILY DNA-binding domain 16 61 IPR016177 GO:0003677
Viun11g00268 137 ProSiteProfiles AP2/ERF domain profile. 16 78 IPR001471 GO:0003700|GO:0006355
Viun11g00268 137 Pfam AP2 domain 17 61 IPR001471 GO:0003700|GO:0006355
Viun11g00268 137 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Viun11g00268 137 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Viun11g00268 137 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00268 Viun-Chr11 2269021 2269495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00268 1 135 AP2-EREBP Transcription Factor Family AT5G65130 40.884 3.29e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun11g00268 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00268 K09286 - vun:114168343 237.654