Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00231 ATGGCTGCTATGGCTGCTGAAATGATTATCGGTGCTCTTGTGTCCTCCTCCGTTCAGATGACTATTGACAATTTGGCTTCTCGTTTTATGGACATATGTTGTGGAAATAAAAGCAACATGAAGCTGTTAAGCAGCTTGAAGCTGAAGCTCCTAGCCGTTGATGTTGTGGCTGATGATGCAGAACAGAAACAATTTACAAATCCACGTGTGAGAGATTGGCTTCTCGCAGTCAAAGATGTCGTGTTTGATGTGGAGGATCTCTTGGAGGAAACAGATCACACACTCTCCAAAACCCAGGTGGAAGCTCAATCTCAGTATGCTGCTAAAAAGGTGTGGAATTTCCTCATATCTTGTTTTGTCAGTTCCTTACAAAATGAAATTGGATCAAGGTTGGAAAAACTCATTGAAGACCTAGAAAATCTTGCAACCAAAAGCCAAATTCTAGGTTTGCAAAAGGCCCATGATGTTGGGGTCAGATCAGGATGGGGCACTAAACTACGATCAACATATTTGCCAAAAGAAAGTGTCATCTATGGCAGAGATAATGACAAAACATTTGTCTTTAACTGGCTCACATCTAAGACTCACAAGAACTTATCTATACTTTCTATTGTGGGAATGGGAGGGGTGGGTAAGACCGCCCTTGCCCAACATGTATTCAATGACCCAAGGATGGATGAGGCTAAATTTGATGTCAAAGCTTGGGTTTGTGTTTCTGATGAATTTGATGTTTTCAAGGTATCAAGAGCAATTCTTGAACATGTTACTGGATCAATCGATAATAGTAGAGATACAGAGATGGTTCACAAAAGTTTGAAAGAAAAATTGACGGGGAAGAAATATCTTCTTATTTTGGATGATGTTTGGAACGAAAACCCATCTAAATGGGAAGAAGTGCAGAAGGCCCTTGTTTTCGGAGCTGAAGGGAGTAGGATTCTTGTGACCACACGTAGTAGGGAAGTTGCTTCTATCATGCGGTCAGAGGAACACTCCCTAAAGCAATTACGGGATAATCATAGCTGCGAGTTGTTTGCTAAACATGCATTCCGAGATGTTGATATTCAAGCAAATCCAGACTGCTGGGAGATTGGCAGGAAGATTGTTAAAAAGTGTAAAGGACTACCTCTTGCTTTGAAAACAATGGGAAGTCTCTTATACAACAAATCATCTGTTTCTGAATGGGAAAGTGTGCTCCAAAGTGAGATATGGGAACTTCCGGAAGAGCATTGTGGTATTATTCCCGCTTTGGCATTGAGCTATATCCACCTTCCTTCCGATCTGAAGGTTTGCTTTGCTTACTGTGCCCTTTTCCCCAAGGATCATGAGTTTAAGAAGGAGCATTTGATGCACTTGTGGATGACTAAAAATCGCTTAAACTGTCCTCAAGAAGAAGTTTGCCAACAATACTTCAATGAACTACTATCAAGATCCTTCTTCGAACAATCAAGTAAAAAGGAAGAAGTATTTGGCATGCATGACCTTCTAAATGATTTGGCAAAATATGTTGGTCAAGGCATACATTTTAGGTGCGAGGCTGGCCAAATAGAGAACATACAAAAAGTAACTCGTCATTACTCAGTTGAATTTGGATACAATCGAGATTTTGATGGGTTTGGAACTTTATGTGATATAGAAAAGTTTCGTACATTTATGCCGACACATAGGAGCACGGATAGCACGGATAATTTATGGAGTTGGTATATCAATATGCCAATACATGAATTGTTGTCCAAGTTTAAGTTCTTACGAATCTTATCTCTCTCTCATCTTACTCTTCTTACAGAGTTACCTGACTCTATTTCCGATCTTGAGTATCTCCGTTCCTTAGACCTATCCTATACTTCCATTAGAATACTAACTGAAAAGACATGTTTGCTTTCCTACTTGCAAATACTGAAGTTGAACTACTGTAGAGATTTGGAGGAATTGCCCACAAATTTGCATCTACTTACCAATTTGTGTCGCCTTGAATTTAAAGGGACTAAAGTGGGAAAGGTGCCACCGCATTTGGAAAAATTGAAGAATCTTAAAGTAGTAATGGATTTTAATGTTGGACAAGGCAGAGATTTCGGTATTCAACAGCTGGGTGAGCTCAACCTTGATGGAAGTGTATCAATTGGGGAGCTACAGAATGTTGAGAATTCGGTGGATGCATTGGAAGCAGATTTGAAGAATAAAACACACCTTGTGGAACTAGAGTTGGAATGGACAAGGAATGGGAACTCTATTGATTCAGAAAAAGTAGAGGACGTAATTGAGAAATTGGAACCTCCCAAAAACTTAAAGGTGTTGTCGATCTATGACTATGCTGGCAAACAATTTCCAAATTGGTTATTGAAAAATTCGTTGTTGAATTTGGAGTCCTTGGAGTTGTGTAGGTGTGCACCTTGCCATCGTTTACCTCCACTTGGTCTATTGCCATTTCTCAAGAATCTGAAGATTTCATCGTGTTTTGAGATAGTGAGTATTGATGCTGATTTTCATGGGAACAACTTTTCTTCATTTAAATCCCTTCAAACATTGTATTTCTCCAATATGAGGCAGTGGGAAAAGTGGGATTGCCAATCTGTGACAAGTGCTTTTCCACGTCTACAACATCTTTCTATAAGTTATTGTCCAAAGTTGAAAGGATACCTACCAAAGCAACTTGTTCCTTTGGAAACACTAGAAATTAAATACTGCCAAAAACTTGAGGCTTCTGCCCCCAAGGCTCTATGTTTAGACCTATGTAATTGCGGAAAGCTACACTTGGACGGGACTACCATAAAAAAGCTGAAAATGGAAGAAACATCGTTGGAAATTGTTAGGTCTGACACTCTTAAACACTTGGAAATTGAACACTTGGAAGCATCAATAGGTGATGATGACTCGGTCTCTCTATGGACCTTTCCACTACATTTCTTCCCAACACTCAGGATCCTTTATCTCAGGAGGCTTGGTAATCTACAAATGATTTCACACTTTGGCGCTCATAATTATCTCCACTATCTGCATATCAGTGAGTGCCCTAAATTGGAATCATTTCCTGGAAACATTCCATTTCTCAAGAGCCTATACATAAAAGACTGTCCTACACTTGAAGCGGTTTTGCCATCATCAAATCCATTTCTCAACTCTGCTCTCTCAACTCGTTGGGGTCTATGTGGTTGCCCCAAGCTCCCAAACTTACGAGAAGAGGCTCTTTCCCAATCAATTTCAATTTTTCATGTAAGAGGTTTTCCTTTAGTCGAAGAGTTTTCCGAGGAAGAAGGGGAAGAATGGGAAAAAGGTTCAAAGAGGTGTTATTAG 3288 0.3981 MAAMAAEMIIGALVSSSVQMTIDNLASRFMDICCGNKSNMKLLSSLKLKLLAVDVVADDAEQKQFTNPRVRDWLLAVKDVVFDVEDLLEETDHTLSKTQVEAQSQYAAKKVWNFLISCFVSSLQNEIGSRLEKLIEDLENLATKSQILGLQKAHDVGVRSGWGTKLRSTYLPKESVIYGRDNDKTFVFNWLTSKTHKNLSILSIVGMGGVGKTALAQHVFNDPRMDEAKFDVKAWVCVSDEFDVFKVSRAILEHVTGSIDNSRDTEMVHKSLKEKLTGKKYLLILDDVWNENPSKWEEVQKALVFGAEGSRILVTTRSREVASIMRSEEHSLKQLRDNHSCELFAKHAFRDVDIQANPDCWEIGRKIVKKCKGLPLALKTMGSLLYNKSSVSEWESVLQSEIWELPEEHCGIIPALALSYIHLPSDLKVCFAYCALFPKDHEFKKEHLMHLWMTKNRLNCPQEEVCQQYFNELLSRSFFEQSSKKEEVFGMHDLLNDLAKYVGQGIHFRCEAGQIENIQKVTRHYSVEFGYNRDFDGFGTLCDIEKFRTFMPTHRSTDSTDNLWSWYINMPIHELLSKFKFLRILSLSHLTLLTELPDSISDLEYLRSLDLSYTSIRILTEKTCLLSYLQILKLNYCRDLEELPTNLHLLTNLCRLEFKGTKVGKVPPHLEKLKNLKVVMDFNVGQGRDFGIQQLGELNLDGSVSIGELQNVENSVDALEADLKNKTHLVELELEWTRNGNSIDSEKVEDVIEKLEPPKNLKVLSIYDYAGKQFPNWLLKNSLLNLESLELCRCAPCHRLPPLGLLPFLKNLKISSCFEIVSIDADFHGNNFSSFKSLQTLYFSNMRQWEKWDCQSVTSAFPRLQHLSISYCPKLKGYLPKQLVPLETLEIKYCQKLEASAPKALCLDLCNCGKLHLDGTTIKKLKMEETSLEIVRSDTLKHLEIEHLEASIGDDDSVSLWTFPLHFFPTLRILYLRRLGNLQMISHFGAHNYLHYLHISECPKLESFPGNIPFLKSLYIKDCPTLEAVLPSSNPFLNSALSTRWGLCGCPKLPNLREEALSQSISIFHVRGFPLVEEFSEEEGEEWEKGSKRCY 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00231 1095 Gene3D - 18 130 - -
Viun11g00231 1095 Pfam NB-ARC domain 184 399 IPR002182 GO:0043531
Viun11g00231 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 434 IPR027417 -
Viun11g00231 1095 Coils Coil 709 729 - -
Viun11g00231 1095 Gene3D Ribonuclease Inhibitor 558 684 IPR032675 -
Viun11g00231 1095 Gene3D - 161 333 IPR027417 -
Viun11g00231 1095 Gene3D - 419 501 IPR036388 -
Viun11g00231 1095 SUPERFAMILY L domain-like 491 895 - -
Viun11g00231 1095 SUPERFAMILY RNI-like 829 1039 - -
Viun11g00231 1095 PRINTS Disease resistance protein signature 201 216 - -
Viun11g00231 1095 PRINTS Disease resistance protein signature 275 289 - -
Viun11g00231 1095 PRINTS Disease resistance protein signature 881 897 - -
Viun11g00231 1095 PRINTS Disease resistance protein signature 371 385 - -
Viun11g00231 1095 PANTHER DISEASE RESISTANCE PROTEIN RP 69 894 IPR044974 GO:0006952
Viun11g00231 1095 Pfam Rx N-terminal domain 14 105 IPR041118 -
Viun11g00231 1095 FunFam Probable disease resistance protein At1g61300 164 330 - -
Viun11g00231 1095 Gene3D - 334 418 IPR042197 -
Viun11g00231 1095 Gene3D Ribonuclease Inhibitor 882 1044 IPR032675 -
Viun11g00231 1095 Gene3D Ribonuclease Inhibitor 688 881 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00231 Viun-Chr11 1831595 1835869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00231 191 395 WRKY Transcription Factor Family AT5G45050 25.571 5.87e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00231 - - pvu:PHAVU_011G202900g 1218.76