Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00201 ATGACTGCTGAAATGATTAAAGGTGCTCTTGTCTCCTCTTTCGTTCAGATCACAATTGACAATTTGGCTTCTCGTTTTGGAGACATATTTCGTGGAGATAAAAGCAACAAGAAGATGCTAAGCAACTTGAAGGTGAAGCTCCTGGCCGTTGATGTTGTGGCTGATGATGCAGAACAGAAACAGTTCACAGATGGACGTGTTAGAGAATGGCTTCTCCAAGCCAAAGATGCCGTGTTTGATGCAGAGGATCTCTTGGAGGAAATAGATCATGCACTCTCCAAAACCCAAGTGGAAGCTCAATCTCATAGTACTGCTACAAAGGTGTGGAATTCCCTCAAATCTCCTTTTGTCAGTTTCTTTAAAAATGAAATTGAATCAAGGATGGAAAAACTCATTGAGAACCTAGAATATCTAGAAACACAGAGCCATGTTCTAGGTTTGAAAAGGAATGATGATGTTGGGGAGGGATCAAGATCGGGAAGTAAATTACGATCAACGTATTTGCCAAACGATAGTGTTATCTACGGCAGAGATGATGACAAAGAATTTGTGTTTAACTGGCTCACATCTCACACTCACAACAATCTGTCTATACTTTCTATTGTGGGAATGGGAGGGGTGGGTAAGACCCTTCTTGCCCAACATGTAATCAATGATCCAAGGACGGATGAGGCTAAATTTGATGTCAAAGCTTGGGTCTGTGTTTCTGATGAATTTGATGTGTTCAAGGTATCCAAAACTATTCTTGAGCATGTTACTAGATCAACTAATAATAGTAGAGATATCGAGATGGTTCACCAAAGTTTGAAAGAAACATTGACAGGGAAAAAATTTCTTCTTATTTTGGATGATGTTTGGAACGAAAACCAATCTAAATGGGAAGAAGTGCAGAAGCCCCTTCTCTACGGAGCCCAAGGTAGTAGGATTGTTGTGACTACCCGTAGTAAGGAAGTTGCTTCTACCATGCGGTCAAAAGAACGCTTTCTAGAGCAATTGCCGGAAGGTCCTAGCTTAGATTTGTTTGCTAAACATGCATTTGCAGATGATTATGATGCTCAATCAAATCCAGAGTGCAACAAAATTGGCGAGAAGATTGTTAAAAAATGTAAAGGACTGCCTCTTGCCTTGAAAACAATAGGAAGTCTATTATACAACAAATTATCTGTTTCAGAATGGGAATTTGTGTTCCAAAGCGAGATATGGGACCTTCCAAAAGAGCGATGTAATATTGTTCCCGCCTTAGCATTGAGCTATATCCACCTTCCTCCCCATTTGAAGGTCTGCTTTGCTTACTGTGCCCTATTTCCGAAGGATTATAAGTTTAAAAAGGAACATTTGATTGAGTTATGGATTACTGAAAATTTCCTACAACACGGTAAGAGTCCAGAAGAAACTGGCCAACAATACTTCAATGAACTACTATCAAGGTCCTTCTTTCAACGATCAGGTGATGCGGAAGAAGTATTTGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTCGCCGGAGACATATATTTCAGGTGCGAAGTTGGTCAAACAAATGAGATACAAAAAGTATCTCGGCATGTTTTATTTGAACTTCGTAACCATGGATGCTTTAGTGGGTTTGGAACTTTATGTAAAACGCAAAGGTTGCGAACATTTCTGCTAACACCAGATAGGAAAATGGTTTTCTTTTGGAAAATGATTTTCTTTTGGAGTTGCAATATGTCCATACATAAATTGTTCACCAAGTTCAAGTTCTTGCGTATCTTATCGCTCTCTCGTTGTTATAGCCTTAAAGAGTTACCTGACTCTGTCGGCATTCTTGAGCATCTCCGTTCGTTAGACCTCTCCCGGACTTATATCAAAAAACTATCTGAAAGTATATGCTCACTTTCCCACTTGCAAATACTGAAGTTGAACTACTGTATGGATTTGGAGGAGTTGCCCTCAAATTTGCATTTAATCACCACTTTGTGTCGTCTTGAATTTACATCCACTAAAGTGAGAAAAGTGCCACCAGGTTTGGAAGAACTAAAGAATCTTAAAGTAAGGATGGATATATTTAAAGTTGACCATAGCATGGAGTCGGGTATTCAACGGCTAGGAAAGCTCAACAACCTTCATGAAAGCCTAGCAATTGAGGGGCTGCAGAACATTGAGAATCCCCGAGAAGCATTAAAAGCAGATTTGAAGAATAAAACACACCTACTGAAGTTGGCGTTGGGATGGGAGAGGACCGGGAACTCTATTGATTCAAAAAAGGAAGAGGACGTAATTGAGAATCTGAAACCTCCTAAAAACTTGAAGGAGTTGTCAATCTTCAACTATGGTGGCAAACAACTTCCAAATTGGTTACTAGAGAATTCACTGTGGAATATGGTGTTATTAAAGTTGGATGGATGTGAATCTTGCCAAAGTTTACCTCCGCTTGGTCTTTTGCCATTTCTTAAGGACCTGTATATTTCAGGGTTTGATGAGATAGTGAGCATTGATGTTGGTTTTCATGGGAATAACTCTTCTTCATTTCAATCCCTTGAAAGGTTGGAGTTCTCCAATATGAGGCAATGGGAAAAATGGGAATGCCAAGCTGTGACAGGTGCTTTTCCAAATCTTCGAATTCTTTCTATAAAGGATTGTCCGAAACTGAAAGGACAGCTGCCAGAGCTACCTGCTCCTTTGGGAATGCTAGAAATGAGAGACTGCCAACAACTTGAAGGTTTCGCTCCCAGGGCTCTAGAATTAAAGCTACATAACTGTGGAAAGGTGCAATTGGATTGGGCTACAATGGAATGGTTGAGAATGGGTGGGCACCACATGAAAGCATTATTCTGTGAAAGGGATGGGTCCCACACTCTTGATGAGTTGGAAATTGAAGAGTCAATCAATGATGACAGCTTTTTTCTAAGCATATTTCCATTAGATTCCTTCCCAACACTCGAGGTCCTTACTCTAAGTCGGTTAAAGAATCTGCAGATGATTTCACTTGATCAAGCTCATCATCATCTCGATGATCTAACAATCAGTAAGTGTCCTAAACTAGAATCATTGCCTGGAAGCATGCATATGTTGCTTCCATCTCTTAGGAGCTTATGTATAAAAGACTGTCCAAGACTTGAGTTGTTGTCTGGCGGAGATTTGCCGTCAAATCTAACCGAGATGAGACTCGAGAACTGCTCTAGACTTGTTGGCTCATTGAAAGGAGGTTTCAGAGACGGTTCGTATTTGGGAAGGTTGTCCATTAGGGAACTGGATGCAAAATGTTTTCCTGAAGAAGGTTTGCTTCCAACCTCTCTTACTTATCTAACCATCGGTGATTGTCCAAACCTAGAAGAATTAGACTATAAGGGGCTTTCTCAACTCTCATCTCTCCGATCATTGACTCTTGAGCACTGCCCCAAACTCCAATGCTTACCAGAGCAGGGTCTTCCCGAGTCAATTTCGAATCTTACAATACAAAATTGTCCTTTGCTCAAACAGCGTTGCCAGAGAGGAGGCGAAGACCGGGAAAAGATTGCTCAGATTCGATATATCTATTTATTCAACTAA 3537 0.404 MTAEMIKGALVSSFVQITIDNLASRFGDIFRGDKSNKKMLSNLKVKLLAVDVVADDAEQKQFTDGRVREWLLQAKDAVFDAEDLLEEIDHALSKTQVEAQSHSTATKVWNSLKSPFVSFFKNEIESRMEKLIENLEYLETQSHVLGLKRNDDVGEGSRSGSKLRSTYLPNDSVIYGRDDDKEFVFNWLTSHTHNNLSILSIVGMGGVGKTLLAQHVINDPRTDEAKFDVKAWVCVSDEFDVFKVSKTILEHVTRSTNNSRDIEMVHQSLKETLTGKKFLLILDDVWNENQSKWEEVQKPLLYGAQGSRIVVTTRSKEVASTMRSKERFLEQLPEGPSLDLFAKHAFADDYDAQSNPECNKIGEKIVKKCKGLPLALKTIGSLLYNKLSVSEWEFVFQSEIWDLPKERCNIVPALALSYIHLPPHLKVCFAYCALFPKDYKFKKEHLIELWITENFLQHGKSPEETGQQYFNELLSRSFFQRSGDAEEVFVMHDLLNDLAKYVAGDIYFRCEVGQTNEIQKVSRHVLFELRNHGCFSGFGTLCKTQRLRTFLLTPDRKMVFFWKMIFFWSCNMSIHKLFTKFKFLRILSLSRCYSLKELPDSVGILEHLRSLDLSRTYIKKLSESICSLSHLQILKLNYCMDLEELPSNLHLITTLCRLEFTSTKVRKVPPGLEELKNLKVRMDIFKVDHSMESGIQRLGKLNNLHESLAIEGLQNIENPREALKADLKNKTHLLKLALGWERTGNSIDSKKEEDVIENLKPPKNLKELSIFNYGGKQLPNWLLENSLWNMVLLKLDGCESCQSLPPLGLLPFLKDLYISGFDEIVSIDVGFHGNNSSSFQSLERLEFSNMRQWEKWECQAVTGAFPNLRILSIKDCPKLKGQLPELPAPLGMLEMRDCQQLEGFAPRALELKLHNCGKVQLDWATMEWLRMGGHHMKALFCERDGSHTLDELEIEESINDDSFFLSIFPLDSFPTLEVLTLSRLKNLQMISLDQAHHHLDDLTISKCPKLESLPGSMHMLLPSLRSLCIKDCPRLELLSGGDLPSNLTEMRLENCSRLVGSLKGGFRDGSYLGRLSIRELDAKCFPEEGLLPTSLTYLTIGDCPNLEELDYKGLSQLSSLRSLTLEHCPKLQCLPEQGLPESISNLTIQNCPLLKQRCQRGGEDREKIAQIRYIYLFN 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00201 1178 Coils Coil 121 141 - -
Viun11g00201 1178 SUPERFAMILY RNI-like 837 1159 - -
Viun11g00201 1178 Gene3D - 417 501 IPR036388 -
Viun11g00201 1178 Gene3D Ribonuclease Inhibitor 567 939 IPR032675 -
Viun11g00201 1178 Gene3D - 332 416 IPR042197 -
Viun11g00201 1178 Pfam NB-ARC domain 178 397 IPR002182 GO:0043531
Viun11g00201 1178 SUPERFAMILY L domain-like 490 889 - -
Viun11g00201 1178 PRINTS Disease resistance protein signature 198 213 - -
Viun11g00201 1178 PRINTS Disease resistance protein signature 272 286 - -
Viun11g00201 1178 PRINTS Disease resistance protein signature 369 383 - -
Viun11g00201 1178 PRINTS Disease resistance protein signature 579 595 - -
Viun11g00201 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 432 IPR027417 -
Viun11g00201 1178 FunFam Probable disease resistance protein At1g63360 418 501 - -
Viun11g00201 1178 Gene3D - 15 129 - -
Viun11g00201 1178 PANTHER DISEASE RESISTANCE PROTEIN RP 66 876 IPR044974 GO:0006952
Viun11g00201 1178 Gene3D - 157 331 IPR027417 -
Viun11g00201 1178 Pfam Rx N-terminal domain 14 102 IPR041118 -
Viun11g00201 1178 FunFam Probable disease resistance protein At1g61300 158 327 - -
Viun11g00201 1178 Gene3D Ribonuclease Inhibitor 947 1173 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00201 Viun-Chr11 1553248 1557890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00201 195 834 WRKY Transcription Factor Family AT5G45050 23.122 1.98e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00201 - - vra:106752401 1475.69