Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00199 ATGATGACAAAGAATTTGTCTTTAACTGGCTCACATTCTAACACTGCCAAAAACCTTTCTGTGCTTTCTATTGTGGGAATGCCAGGGCTGGGTAAGACCGCTCTTGCCCAACATGTATTCAATGATCCAAGGATGTCTGAGGCTAAATTTGATATCAAAGTCTGGGTTTGTGTTTCCGATGAATTTGATGTTTTCAATATATCAAGAGCAATTCTTGAGGGTGTTACTAGATCAACTGATGATAGTAGAGATACAGAGATGGTTCACAGAAGATTGAAAGAAAAATTGATGGGAAAAAAATTTCTTCTTGTTTTGGATGATGTTTTGAACAAAAACCAATCTAAATGGGAAGAAGTTCAGAAGGTCCTTGTTTTCGGAGCCCAAGGGAGTAGGATTCTTGTCACTACACGTAATAAGGACGTTGCTTCTACCATGCGGTCAGAAGAATACTTTCCAAAACTATTACAGGAAGATGATTGCTGGAAGTTGTTTGCTAAATATGCATTTCGTGATGATGATACTCAACCAAATCCAGAGTGCAGGGATATTGCCATGGAGATTGTTAAAAAATGTAAAGGATTACCTCTGGCCTTGAAAACAATGGGAAGTCTATTATACAACAAATCATCTGTTTCAGAGTGGGAAACTGTGTTCAGAAGCGAAATATGGGAATTGCCAAAAGTTCGTTGTGATATTGTTCCCACTTTAGCATTGAGCTATATCCATCTTCCTTCCCATCTGAAGGCATGTTTTTCTTACTTTGCCCTGTTCCCCAAGGATTATGAGTTTAAGAAGGAACACTTGATGCACTTGTGGATGACTAAAAATCTATGTTGTCGTCAACATAGTAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGATCCTTCATACAACAATCAGGTCAAGAGGAAGAAGTATTTGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTTGCTGGAGACATATACTTGAGGTGTGAAGTTGGTCAAATAGAGAAGATACAAAAAGAAACTCGTCATTTTTCAGTTGAACTTGAATATGATGATCAATATTTTGATGGGTTTGGAACTTTATGTAATACAGAAAGGTTACGTACATTTATGCCAATAAGTAGAAGCAGGTTTTCTTATCACTGGCATTGTGGTATCAATATGTTGATACATGAATTATTCTCCAAGTTTAAGTTCATACGGATTTTATCTCTGTCTGGTTATTCTGACATTAAAGAGATACCTGATTCTATTGACAATCTTAAGCATCTTCGTTCCTTAGACCTCTCCCATACTGCAATAGAAAAACTAACTGGAAAGATATGTTTACTCTCCCACTTGCAAATACTGAAGTTGAACTTTTGTAAAAATTTGGAGTTATCCTCAAATTTGCATTTACTCACCAATTTGTGTCGACTTGAATTTATAAGCACTACATTGGCAAAGGTGCCACCACATTTAGGAAAACTGAACAATCTTAAAGTAATGATGGATTCCTTTAATGTTGACCATGGCAGGCGAGTTGGGTGTTCACTGAAAGAAGCTTTCTAA 1566 0.3672 MMTKNLSLTGSHSNTAKNLSVLSIVGMPGLGKTALAQHVFNDPRMSEAKFDIKVWVCVSDEFDVFNISRAILEGVTRSTDDSRDTEMVHRRLKEKLMGKKFLLVLDDVLNKNQSKWEEVQKVLVFGAQGSRILVTTRNKDVASTMRSEEYFPKLLQEDDCWKLFAKYAFRDDDTQPNPECRDIAMEIVKKCKGLPLALKTMGSLLYNKSSVSEWETVFRSEIWELPKVRCDIVPTLALSYIHLPSHLKACFSYFALFPKDYEFKKEHLMHLWMTKNLCCRQHSRTPEEVCQQYFNDLLSRSFIQQSGQEEEVFVMHDLLNDLAKYVAGDIYLRCEVGQIEKIQKETRHFSVELEYDDQYFDGFGTLCNTERLRTFMPISRSRFSYHWHCGINMLIHELFSKFKFIRILSLSGYSDIKEIPDSIDNLKHLRSLDLSHTAIEKLTGKICLLSHLQILKLNFCKNLELSSNLHLLTNLCRLEFISTTLAKVPPHLGKLNNLKVMMDSFNVDHGRRVGCSLKEAF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00199 521 PRINTS Disease resistance protein signature 191 205 - -
Viun11g00199 521 PRINTS Disease resistance protein signature 95 109 - -
Viun11g00199 521 PRINTS Disease resistance protein signature 21 36 - -
Viun11g00199 521 PRINTS Disease resistance protein signature 424 440 - -
Viun11g00199 521 Gene3D Ribonuclease Inhibitor 371 517 IPR032675 -
Viun11g00199 521 Gene3D - 3 151 IPR027417 -
Viun11g00199 521 PANTHER DISEASE RESISTANCE PROTEIN RP 10 505 IPR044974 GO:0006952
Viun11g00199 521 Pfam NB-ARC domain 18 218 IPR002182 GO:0043531
Viun11g00199 521 FunFam Probable disease resistance protein At1g63360 240 325 - -
Viun11g00199 521 Gene3D - 240 325 IPR036388 -
Viun11g00199 521 FunFam Probable disease resistance protein At1g61300 8 150 - -
Viun11g00199 521 FunFam Probable disease resistance protein At5g66910 154 239 - -
Viun11g00199 521 Gene3D - 154 239 IPR042197 -
Viun11g00199 521 SUPERFAMILY L domain-like 314 501 - -
Viun11g00199 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 253 IPR027417 -
Viun11g00199 521 ProSiteProfiles Leucine-rich repeat profile. 428 449 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00199 Viun-Chr11 1548504 1550069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00199 18 501 WRKY Transcription Factor Family AT5G45050 23.121 5.80e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00199 - - vun:114169390 1060.83