Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00194 ATGGCTGATGCCAGTCCCAGGACTGATATTTCTACAGATGTCGACACTGATGACAAGAATCAGCCGTTTGATAGAAATCAATCCCTTGCTATTGTTTCTGACTCTAGTGACAGGTCAAAAGATAAATCAGACCAGAAGACTCTTCGCAGGCTTGCCCAGAACCGTGAAGCTGCAAGAAAAAGCCGTTTGAGAAAGAAAGCTTATGTCCAACAGTTAGAAAGCAGTCGCTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGTATCTTCATATCAAGCTCGGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATAAATGAACTAAGAGCTGCTGTAAATTCTCATGCAAGTGACACTGAACTGCGCATGATTGTTGATGGTATATTGGCACATTATGATGAGATTTTTAGGCTGAAGGGTGTTGCAGCCAAGGCTGATGTTTTCCATTTGTTGTCTGGTATGTGGAAAACGCCTGCTGAGAGGTGTTTCTTGTGGCTCGGTGGTTTTCGGTCATCTGAACTTCTCAAGCTGCTGGCAAATCAATTGGAACCTCTGACAGAGCAGCAGCTGATGGGTATCACCAACTTGCAGCAATCTTCTCAACAGGCAGAAGATGCATTGTCTCAAGGCATGGAAGCATTGCAACAGTCCCTTGCAGAGACACTGTCCACTGGAGCACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTAGGGACACTTGAAGGCTTCATTCGGCAGGCCGATAATCTTCGCCAGCAGACTCTGCAACAAATGCACCGGATTCTGACGACTCGCCAATCGGCGCGTGCCCTCCTCGCCATACACGACTATTTCTCGCGGCTGCGTGCTCTGAGTTCACTCTGGTTGGCTCGCCCAAGAGATTGA 996 0.4789 MADASPRTDISTDVDTDDKNQPFDRNQSLAIVSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00194 331 SMART brlzneu 42 105 IPR004827 GO:0003700|GO:0006355
Viun11g00194 331 Pfam Seed dormancy control 128 203 IPR025422 GO:0006351|GO:0043565
Viun11g00194 331 FunFam BZIP family transcription factor 45 94 - -
Viun11g00194 331 SUPERFAMILY Leucine zipper domain 46 89 IPR046347 GO:0003700|GO:0006355
Viun11g00194 331 ProSiteProfiles DOG1 domain profile. 111 328 IPR025422 GO:0006351|GO:0043565
Viun11g00194 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 49 64 IPR004827 GO:0003700|GO:0006355
Viun11g00194 331 PANTHER TRANSCRIPTION FACTOR TGA9 18 330 - -
Viun11g00194 331 MobiDBLite consensus disorder prediction 1 48 - -
Viun11g00194 331 Coils Coil 122 142 - -
Viun11g00194 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 44 88 IPR004827 GO:0003700|GO:0006355
Viun11g00194 331 Coils Coil 65 92 - -
Viun11g00194 331 Pfam Basic region leucine zipper 42 88 IPR004827 GO:0003700|GO:0006355
Viun11g00194 331 Gene3D - 45 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00194 Viun-Chr11 1504151 1514758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00194 1 331 bZIP Transcription Factor Family AT3G12250 80.665 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun11g00194 DOG1 4.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00194 K14431 - gmx:100101881 596.275