Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00177 ATGGTTATTTCTGAAGTGGTAAAGCCACTGATTGCTCCAGTCTGTATGGCTATCTTCACATTTTTTACCAGAAACGATGTTGACGCTGCTATCCTAGAAGAGTTAAAGACACAGGTTCTGTGCTTGAACTCGTTTCTTGGAGATGCTGAAGAAAAACAGGTTTCTAACCCAGGCGTGAAAATCTGGGTTGATGAACTCAGAGAAGCTGTCTATGATGCAGATGACGTTATGGATCAGCTTGCTGCCAAACATTTGATTGGATCAACGATAGTACTGTCTAAGGTAACTGACTATCTTAACTGCATAATAGAACCCTTCGATGAAGGCATGAAATCTAAACTGAACAGAATAAATTATAGGTTGAAATCGTTAGCTCATAATAGATCTCTGCTTGGTCTCAAAGAAGGTGGTGGAACTTGTTTGATAAATGAAGCTGAAGTATACGGTAGGGATGGTGATAGAGATCACGTTGTAGATACTTTGTTATCTGAACCAACTTGTTTACCAAATGTCATTGCTGTAGTTGGGATGGCTGGGATGGGGAAGACAACACTGTCTCAGATGGTGTACCATCATTCCGCTGTGAAGAGTAATTTTAATGTTAGATCATGGGTTTATATATCAGATGGTTCAAATGTGTTTGAAGTAACCAAAAAAATTTACGAGTCACTGACTTATTGCAATTGTGAGATAAGAGACTTGAACACGCTTCAGATGAAACTACAACTTGTGTTGCATAATAAAAAATTTCTGCTAGTTTTGGATGACTATTGGACCGGGGGGTTTCTTGACTGGGACCTCCTAAAGAGACCCTTAGAAAGTGGGAAGCATGGAAGCTGTATAATAGTTACCACACGGAATAGAAGTGTTGCGTTGACTATACATGCAGCTGAAACCTACATGCTTCCACGTCTAGAAGACGAGGCTTGCAGGAAGTTATTTACTCACCATGCATTCAGAAGCAAAGATCCTGAGAAAACTCCTGCCTTAAAGGATATCGGTGAGGAGATAGTAAAGAAATGCAAAGGTCATCCTTTATCTGTGAAAGCACTTGCCAGTCTCTTGACTTTCAACGCTGAAGTTAAGGATTGGAACGGTGTGTTGCAAAGTAAGGTGTTGAATATTCCAGCTAATCAAAGCAACATTCTACATTCCTTAATGTTGAGCTACAGATATCTCCCTGGACATATGAAGCAATGTTTTGCTTACTGTTCCTTGTTCCCTAAAGGTCACAAGGAAAGTAAGAGGAACTGCATCCATTTATGGATGGCTGAGGGTCTTCTACCAGAGTCAAAAAATGAAGAAACAACGGAAGAGGTAGGAGAGAAATATTTCAATGAATTCTCATCGAGGTCTATTCTGCAGGTCGAAAATTCATTGTTTTATATGTATGACCTTATGAACGACCTAGCACAATACGTTGGGGGACAATTTTTTCACAAGATGGAGCCCAATGATCATCAATCCCAGAACAAGGTTCGGCATTTATCATACTTGTTGGAGGAGTTTGAAGGGGTAGAGAAATTTGTATCCATCTTTCAGCTTCCACATCTTAGAACTTTCCTACCATTTGCAAACTAA 1581 0.3985 MVISEVVKPLIAPVCMAIFTFFTRNDVDAAILEELKTQVLCLNSFLGDAEEKQVSNPGVKIWVDELREAVYDADDVMDQLAAKHLIGSTIVLSKVTDYLNCIIEPFDEGMKSKLNRINYRLKSLAHNRSLLGLKEGGGTCLINEAEVYGRDGDRDHVVDTLLSEPTCLPNVIAVVGMAGMGKTTLSQMVYHHSAVKSNFNVRSWVYISDGSNVFEVTKKIYESLTYCNCEIRDLNTLQMKLQLVLHNKKFLLVLDDYWTGGFLDWDLLKRPLESGKHGSCIIVTTRNRSVALTIHAAETYMLPRLEDEACRKLFTHHAFRSKDPEKTPALKDIGEEIVKKCKGHPLSVKALASLLTFNAEVKDWNGVLQSKVLNIPANQSNILHSLMLSYRYLPGHMKQCFAYCSLFPKGHKESKRNCIHLWMAEGLLPESKNEETTEEVGEKYFNEFSSRSILQVENSLFYMYDLMNDLAQYVGGQFFHKMEPNDHQSQNKVRHLSYLLEEFEGVEKFVSIFQLPHLRTFLPFAN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00177 526 Gene3D - 26 126 - -
Viun11g00177 526 Gene3D - 139 301 IPR027417 -
Viun11g00177 526 CDD RX-CC_like 32 78 IPR038005 -
Viun11g00177 526 Pfam Rx N-terminal domain 32 85 IPR041118 -
Viun11g00177 526 Gene3D - 390 473 IPR036388 -
Viun11g00177 526 Gene3D - 304 389 IPR042197 -
Viun11g00177 526 FunFam Probable disease resistance protein At1g61300 141 299 - -
Viun11g00177 526 Pfam NB-ARC domain 154 390 IPR002182 GO:0043531
Viun11g00177 526 PRINTS Disease resistance protein signature 171 186 - -
Viun11g00177 526 PRINTS Disease resistance protein signature 244 258 - -
Viun11g00177 526 PRINTS Disease resistance protein signature 341 355 - -
Viun11g00177 526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 404 IPR027417 -
Viun11g00177 526 PANTHER DISEASE RESISTANCE PROTEIN RP 34 497 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00177 Viun-Chr11 1460107 1461687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00177 172 348 WRKY Transcription Factor Family AT5G45050 27.835 7.34e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00177 - - vun:114169389 1068.53