Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00170 ATGATGATGATGATGGAGGAAGAGGAGAAAGAAGAAACAACCAACCACAACCTAGACAAAAACAAAAACCAAAACCAAAACCAAAACCAAAACCTTAACCTAGGACACAACAACTCTCTCCCGATCAAAGAAGAGAGTGGTTTCAGATCAAAGGGTTTCGGAGGTGGTGGTGGTGACAGAGTGAAGAGAGATGAATGGAGTGAAGGAGCAGTTTCAACCCTTCTTGAGGCCTACGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAAGGCCATGACTGGGAGGACGTGGCTCGGCACGTGTCGGCACGTGCCAACTGCACCAAGTCGCCGAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCGATGAAGAAGAGGTACAGATCAGAGTCTGCAACTGCAGAACATCCCTCCTCATGGCCTCTCTATTCGCGCCTCGATCTTCTTCTCAGGGGAACCGGCCCGCTCCTCCCCTCGCCGCCGCCGCCGCCGCCACCGCCGCCGCTCCCTGCGGTACTCCCGGCGCCACCCTCGCCGCCGTCAGAGCCACTTGCAGTTGTGCAGAACTCGCATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGAAGATGTGTTAGCAGCAAAGTCTTGTGAACATGTATCTAGCAAGAATCCTTTGGACACAGACAGCAGCACTCCTGCACTTTACAGCAATAAGAAGGAAGAGATGAGATGTAACAAGAGGAAGAAGAAGGTGATTGAGAAGACAACAGCAGGGAGAAGAAGAAAAGAGTATATGGAGATAGCAGAAAGCTTAAGATGGTTAGCAGAAGCTATGATAAGGTCAGAAGAAGCAAGAATGGAGACAATGAAGGAGATAGAGAGAATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGATCTCAAGAGAACTCAAATAATTGCCAACACACAGTTAGAGATTGCTAGGATCTTTGCTACTGTCAACAACAAACCTCTTGATTCATCTCTCAGGATTGGAAGGAGTTAA 1020 0.4892 MMMMMEEEEKEETTNHNLDKNKNQNQNQNQNLNLGHNNSLPIKEESGFRSKGFGGGGGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARANCTKSPKTSTQCKNKVESMKKRYRSESATAEHPSSWPLYSRLDLLLRGTGPLLPSPPPPPPPPPLPAVLPAPPSPPSEPLAVVQNSHGSNGVDDKLVKEDVLAAKSCEHVSSKNPLDTDSSTPALYSNKKEEMRCNKRKKKVIEKTTAGRRRKEYMEIAESLRWLAEAMIRSEEARMETMKEIERMRVEAEAKRGEMDLKRTQIIANTQLEIARIFATVNNKPLDSSLRIGRS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00170 339 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 27 325 IPR044823 -
Viun11g00170 339 MobiDBLite consensus disorder prediction 19 44 - -
Viun11g00170 339 MobiDBLite consensus disorder prediction 157 185 - -
Viun11g00170 339 MobiDBLite consensus disorder prediction 1 63 - -
Viun11g00170 339 MobiDBLite consensus disorder prediction 155 199 - -
Viun11g00170 339 Gene3D - 66 131 - -
Viun11g00170 339 MobiDBLite consensus disorder prediction 1 18 - -
Viun11g00170 339 FunFam Trihelix transcription factor ASIL2 66 131 - -
Viun11g00170 339 Pfam Myb/SANT-like DNA-binding domain 63 150 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00170 Viun-Chr11 1413540 1416720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00170 40 158 Trihelix Transcription Factor Family AT3G14180 36.585 1.36e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun11g00170 Myb_DNA-bind_4 3.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00170 - - gmx:100784245 424.091