Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00163 ATGGCATTAGAACTTGTTGGTGGTGCTCTTCTTTCTGTTTTCCTTGATGTTGCATTCAAGAAGTTAGCTTCTTCCCAAATTCTCGATTTCTTTCGTGCAAGAAAGCTTGATGAGAAGTTGTTGAACAATTTGAAAACCAAGCTGAACTCCATCCATTCTCTGGCTGATGATGCAGAGAGAAAGCAGTTCACGAATTCATATGTCAGAAACTGGTTGGTTGAGGTCAAAGATGTTGTCCTTGATGCAGAGGATCTCTCGGATGATATACAAATGCTCTCCAAAAGACAAGTGGATGCTGATTCTGAATCTCAAACCTCTGCATGTTGTACGTTCAAGGTACTCAATTTCTTCAAATCTTCTCCTATTACTTCCTATAATAAGGAAATTGAGTCTAGGATGCAAGAAGTCCTTGACAAACTAGATACTCTCTTAAGTCAACGGGGTAATCTAGGATTGAAAACAGGTAGGGCTATTGGATCTGGGTTGGGCAATGAACTGCCACAGAAATCACAAACAACATCGTTGGTTGTTGGAACTGATATCTATGGCAGAGATGATGATAAAAAACAGATCGTTGACTGGTTGATATCTGACAACAACAATCCTAACCTGCCATCAATACTTTGTATTGTGGGAATGGGCGGGCTGGGTAAGACCACGCTTGCCCAACATGTATTCAATGACCCAAAGATAAACGAGGCTAAATTTGATGTCAAAGCCTGGGTTTGTGTTTCAGATGAATTTGATGTTTTCAAAGTATCAAGAGCAATTCTTGAGGCTGTTACTGAATCAACTGATGATAGTAGAGATCTAGAGATGGTCCACAAAAGATTGAAAGAAGAATTGACTCAGAAGAAATTTCTTCTTGTTTTGGACGACCTTTGGAACGAGAACCAACATAATTGGGAAGAAGTGCAGAAGCCCCTCATGTTCGGAGTCCAAGGGAGTAGGATTCTGGTCACTACACGTAGTAAGGAAGTTGCCTCTACCATGCAGTCAGAAGTTTACTCCTTAAAGCAGTTACAAGAAGATGATTGCTGGAACTTGTTTTCTAAATGTGCATTCCGAGATGATGATACTCAACCAAATCCAGAGTGTAGGGAGATTGGCATGAAGATTGTTAAAAGATGTAAAGGACTACCTCTTGCCTTGAAAACAATGGGAAGTCTATTATACAACAAATCATCTGTTTCAGAGTGGGACACTGTGTTCCAAAGCGAAATATGGGAATTTTCACAAGAGCGTTATGATATTGTTCCCGCTTTAGCGTTGAGCTATATCCACCTTCCTTCCCATCTGAAGGTCTGCTTTGCTTACTGTGCCATGTTCCCCAAGGATTATGAGTTTAAAAAGGAGCATTTGATGCACTTGTGGATGACTGAAAATCTCTTACATTGTCCTTCAGAAAACGTTTGCCAACAATACTTCAATGATCTACTATCAAGATCTTTCTTCCAACAATCAGGTGAAAAGGAAGATGTATATGTGATACATGACCTTCTAAATGATTTGGCAAAGTATGTTGGTGGAGGCATATACTTTAGGTGGGAAGTTGGTCAAAACGAGAAGATACAAAAAGTAACTCGTCATTATTCAGTTGAACTTGGACACAATCGATATTTTGATGGGTTTGGGTTTGGAACCTCATGCAACACAGAAAGGTTACGCACATTTATGTTGACAGAGCTGCCTGACTCTGTTAGCAATCTTGAGCATCTTCGATTGTTAGACCTCTCACATACCATACTAAGTCAACTTTCAGAAAAGATATGTTCACTCTCCCACTTGCAAATACTAAAGTTGAACTATTGTATATATTTGGAGGAGTTGCCTTCAAATTTGTATTTACTCACCAATTTGTGTCGCCTTGAATTGATAGAGAATAATTTGGAAAAGTTGCCGCCGGGTTTGGGAAAACTGAAGAATCTTACAGTAGTAATGGAATCCTTTAATGTTGGCGATGGTTGGAGGGAGTTCGGTATTCAACAACTAGGAGAGCTCAACCTTGATGGACATCTATCAATTAAGGAGCTTCAGAATATTGAAAATTCAGTGGATGCATCAAAAGCATGTTTGAGGAATAAAAGACTCCTTATGAAGTTAGAGTTGAGATGGAGAGGGAATAGGAGGTTTATTGATTCGAAAAATGAAGAGGAGGTAATTAAGAATCTGCAACCTTCCGAAAACTTAAAAGAGTTGGCAATCTTAGAATATGGTGGGAAACAACTTCCAAACTGGTTACATTCATTACCGTACCTGGTGTCCTTAGAGTTGAATGGATGTGGGTATTGTGAACGTTTACCTCCCCTTGGACTTTTGCCATTTCTTGAGGACTTGAGTATTGATGGACTTGATGGGATAGTGAGTATTGATGCTGATTTTTATGGGAGCAACTCTTGTTCATTTAAGTCTCTACAAAGTTTGGTATTCTCCCATATGCGACAATGGAAAAAATGGGAATGCAAAGCAGGTGCTTTTCCACGTCTACAATATCTTACTATAACTTCATGTCCTAAGCTGAAAGGAGAGCTGCCAAAGCAACTTATTCCTTTGAAAACACTAACTATTAGAGACTGCCAACAACTTGAGGCTTCCGCTCCTAGGGCTCTAGATTTAAAGCTATATGACTGTGGAAAGTTGCATTTTGACTGGGCTACCATGAAAGGTCTCATATTGGAAGCATCATTGCTGGAAATTGTTTGGTCTGACACTGTTGAATATTTGTGTATTATCTTTAAGTCAATGAGTGATGATTGTGTCGCTATAAGGATCTTTCCATTGGATTCCCTCCCAAGACTCAGGAAGTTGTATCTCGGTGGGTTTCCTAATCTGCAGATGATTTCACAGGATCACGTTCAAAATCATCTTGTGGGTATGACAATCGAAAAGTGTCCTAAATTTGAATCATTGCCTGCAAACATTCATATGATGCTTCCATCTCTCAATGACCTAAACATAGAAGACTGTCCAAAACTTGAGTCCTTCCCTGAGGGAGGTTTGCCATCAAATCTAGAGCATCTGACAATAAAGAGGTGCCTTAAATTGGAATCATTGTCTGGAAACATGCATATGTTGTCTCTCAAGAATCTATGGATAGAAGACTGTCCAAAACTTGAGTCGTTCATTAAGGGAGGTTTGCCGTCAAATCTAAGATTTATGAAACTCAATAATTGCTCTACACTACTTGTTGACTCACTGAAAGGAGCATTCAGAGACAATCCTTCTCTCGAAAGCTTGACCATTGAAAAAGTGGATGCAAAATATTTTCCTGCTGAAGGTTTGCTTCCACTCTCTCTTACTGAACTAATAATGCGTGATTGTCCAAATCTAGAAAAACTGGACTATAAGGGTCTTTATCAACTCTCATCCCTCCAATCATTGCGTCTTGATAACTGTCCCAAGCTTCAATGCTTACCAGAGGAGGGTCTTCCCACATCAATTTCATTTCTTTACATAGCTCGTTGTCCAGTGCTCATTCAGCGTTGCCAAAAAGAAAGAGGCGAAGACCGGGAAAAACTTTCTCACATTAAACACTTGTATATAATGTGGTGA 3552 0.3953 MALELVGGALLSVFLDVAFKKLASSQILDFFRARKLDEKLLNNLKTKLNSIHSLADDAERKQFTNSYVRNWLVEVKDVVLDAEDLSDDIQMLSKRQVDADSESQTSACCTFKVLNFFKSSPITSYNKEIESRMQEVLDKLDTLLSQRGNLGLKTGRAIGSGLGNELPQKSQTTSLVVGTDIYGRDDDKKQIVDWLISDNNNPNLPSILCIVGMGGLGKTTLAQHVFNDPKINEAKFDVKAWVCVSDEFDVFKVSRAILEAVTESTDDSRDLEMVHKRLKEELTQKKFLLVLDDLWNENQHNWEEVQKPLMFGVQGSRILVTTRSKEVASTMQSEVYSLKQLQEDDCWNLFSKCAFRDDDTQPNPECREIGMKIVKRCKGLPLALKTMGSLLYNKSSVSEWDTVFQSEIWEFSQERYDIVPALALSYIHLPSHLKVCFAYCAMFPKDYEFKKEHLMHLWMTENLLHCPSENVCQQYFNDLLSRSFFQQSGEKEDVYVIHDLLNDLAKYVGGGIYFRWEVGQNEKIQKVTRHYSVELGHNRYFDGFGFGTSCNTERLRTFMLTELPDSVSNLEHLRLLDLSHTILSQLSEKICSLSHLQILKLNYCIYLEELPSNLYLLTNLCRLELIENNLEKLPPGLGKLKNLTVVMESFNVGDGWREFGIQQLGELNLDGHLSIKELQNIENSVDASKACLRNKRLLMKLELRWRGNRRFIDSKNEEEVIKNLQPSENLKELAILEYGGKQLPNWLHSLPYLVSLELNGCGYCERLPPLGLLPFLEDLSIDGLDGIVSIDADFYGSNSCSFKSLQSLVFSHMRQWKKWECKAGAFPRLQYLTITSCPKLKGELPKQLIPLKTLTIRDCQQLEASAPRALDLKLYDCGKLHFDWATMKGLILEASLLEIVWSDTVEYLCIIFKSMSDDCVAIRIFPLDSLPRLRKLYLGGFPNLQMISQDHVQNHLVGMTIEKCPKFESLPANIHMMLPSLNDLNIEDCPKLESFPEGGLPSNLEHLTIKRCLKLESLSGNMHMLSLKNLWIEDCPKLESFIKGGLPSNLRFMKLNNCSTLLVDSLKGAFRDNPSLESLTIEKVDAKYFPAEGLLPLSLTELIMRDCPNLEKLDYKGLYQLSSLQSLRLDNCPKLQCLPEEGLPTSISFLYIARCPVLIQRCQKERGEDREKLSHIKHLYIMW 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00163 1183 Gene3D - 166 339 IPR027417 -
Viun11g00163 1183 Pfam NB-ARC domain 185 405 IPR002182 GO:0043531
Viun11g00163 1183 SUPERFAMILY L domain-like 497 863 - -
Viun11g00163 1183 SUPERFAMILY L domain-like 926 1169 - -
Viun11g00163 1183 Coils Coil 41 61 - -
Viun11g00163 1183 Gene3D Ribonuclease Inhibitor 895 1042 IPR032675 -
Viun11g00163 1183 Gene3D Ribonuclease Inhibitor 523 875 IPR032675 -
Viun11g00163 1183 PRINTS Disease resistance protein signature 377 391 - -
Viun11g00163 1183 PRINTS Disease resistance protein signature 281 295 - -
Viun11g00163 1183 PRINTS Disease resistance protein signature 568 584 - -
Viun11g00163 1183 PRINTS Disease resistance protein signature 207 222 - -
Viun11g00163 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 440 IPR027417 -
Viun11g00163 1183 SMART LRR_typ_2 617 640 IPR003591 -
Viun11g00163 1183 SMART LRR_typ_2 570 593 IPR003591 -
Viun11g00163 1183 SMART LRR_typ_2 1121 1145 IPR003591 -
Viun11g00163 1183 PANTHER DISEASE RESISTANCE PROTEIN RP 41 859 IPR044974 GO:0006952
Viun11g00163 1183 Gene3D - 425 507 IPR036388 -
Viun11g00163 1183 Pfam Rx N-terminal domain 11 98 IPR041118 -
Viun11g00163 1183 Gene3D - 340 424 IPR042197 -
Viun11g00163 1183 FunFam Probable disease resistance protein At1g61300 164 335 - -
Viun11g00163 1183 Coils Coil 126 146 - -
Viun11g00163 1183 Gene3D - 17 123 - -
Viun11g00163 1183 Gene3D Ribonuclease Inhibitor 1043 1182 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00163 Viun-Chr11 1345318 1349101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00163 210 404 WRKY Transcription Factor Family AT5G45050 29.808 2.44e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00163 - - vun:114170078 2360.87