Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00161 ATGGCATTAGAACTTGTTGGTGGTACTCTTCTTTCTGTTTTCCTTAATGTTGCATTCGAGAAGCTAGCTTCTCCCCAAATTCTCGATTTCTTTCGTACAAGAAAGCTTGATGAGGAGTTGCTGAACAAGTTGAAAACCAAGCTGAACTCCATCCATTCTCTGGTTGATGATGCAGAGAGAAAGCAGTTCACGAATCCACATGTCAAAAACTGGTTGCTTGAGGTCAAAGATGCTGTCCTTGATGCAGAGGATCTCTTGGATGATTTACAAATGCTCTACAAAAGACAAGTGGATGCTGATTCTGAATCTCAAACCTCTGCATGTTGTACGTTCAAGGTACTCAATTTCTTCAAATCTTCTCCTATTAGTTCCTATAATAAGGAAATTGAGTCTAGGATGCAAAAAGTCCTCGACAAACTAGATACTCTCTTAAGTCAAAGGGGTAATCTAGGATTAAAAACAGTTAGGGTTGTTGGATCTGGGTTGAGCAATGAACTGCCACAGAAATCACAAACAACATCGTTGGTTGTTGGAACTGATATTTATGGCAGAGATGATGATAAAAAACAGATCGTTGACTGGCTGATATCTGACACCAACAATTCTAACCAGCCATCAATACTTTCTATTGTAGGAATGGGCGGAGTGGGTAAGACCACTCTTGCTCAACATGTATTCAATGACCCAAATGTGGATGAGGCTAAATTTGATGTCAAAGCCTGGGTTTGTGTTTCAGATGAATTTGATGTTTTCAAAGTATCAAGAGCAATTCTTGAGGCTATCACAAAATCAACTGATGATAGTAGAGATCTAGAGATGGTTCACACAAGATTAAAAGAACAATTAACTAAGAAGAAATTTCTTCTTGTTTTGGACGACCTTTGGAACGAAAACAAACCTAAATGGGAAGAACTGCAGAAGCCACTAATGTTTGGAGTCCAAGGGAGTAAGATTATTGTGACCACACGTAGCAAGGAAGTTGCTTCTACCATGCGGTCAGAAGTTCACTCCCTAAAGCAATTACAAGAAGATGATTGCTGGAACTTATTTGTTAAATATGCATTTAAAGACGATGATACTCAACAAAATCTAGAATGCACAGAGATTGGCAAGAAGATAGTTGAAAAATGTAAAGGACTACCTCTAGCATTGAAAACAATGGGAAGTCTATTATACAACAAATCATCTGTTTCAGAGTGGGAAAGTGTGTTCCAAAACGAAATATGGGAATTTTCACAAGAGCGTTGTGATATTATCCCTGCTTTAGCACTGAGCTATATCCACCTTCCTTCTCATCTGAAGGTCTGCTTTGCTTACTGTGCCTTGTTTCCCAAGGATTATGAGTTTAAGAAGGAGCATTTGATGCACTTGTGGATGACTGAAAATCTCCTACACTATCCTTCAGAAAATTTTTGCAAACAATACTTCAATGATCTACTATCAAGATCCTTCTTTCAACAATCAGGTGAAAAGGAAGAAGTATTTGTGATGCATGACCTTTTAAATGATTTGGCAAAATATGTTGGTGGAGGCATATACTTTAGGTGGGAAGTTAATCAAGAAGGGAAGATACAAAAAGTAACTCGTCATTTTTCAGTTGAAGTTGGATACAATCAGTATTTTGATGGGTTTGGAACCTCATGCAACACAAAAAGGTTACGTACATTTATGTCGACAGGTTTGGGAAAACTGAAGAATCTTAAAGTAGTCATGGAATCCTTTAATGTTGGGCATGGCAGGGAGTTCGGTATTCAACAGCTAGGAGAGCTCAACCTTGATGGAAGTCTATCAATTAAGGCGCTGGAAAATATTGAGAATTCAGTGGATGCATCAGAAGCATATTTGAAGAATAAAACACTCCTTGTGAAGTTAAAGTTGAGATGGACAAGGAATAGAGACTCTATTGATTCGAAAAAAGAAGAGGAGGTAATTAAGAACCTGCAACCTTCCGAAAACTTAAAGGAATTGGTAATCTTACACTATGGTGGGAAAGAATTTCCAAACTGGCTACATTCATTACTGAACTTGGTGTCCTTAGAGTTGAATGGATGTGACTCTTGTGAACGTTTACCTCCTCTTGGACTTTTGCCATTTCTTGAGGACTTGAATATTATTGGACTTGACGGGATAGTGAGTATTGATGCTGATTTTTATGGGAGCAACTCCTCTTCATTTAAGTCTCTGCAAAATTTGAGATTCTTTAATATGGGACAATGGAAAAAATGGGAATGCAAAGCAGGTATTTTTCCAAATCTTCAAACACTTTATATAAGTGATTGTCCCAAGCTGAAAGGAGAGTTGCCAGAGCAACTTGTTCCTCTGAAAAAATACAAATTACAGAGTGCCAACTACTTGAGGCTTCCGCTCCAAGAGCTCTAG 2379 0.3817 MALELVGGTLLSVFLNVAFEKLASPQILDFFRTRKLDEELLNKLKTKLNSIHSLVDDAERKQFTNPHVKNWLLEVKDAVLDAEDLLDDLQMLYKRQVDADSESQTSACCTFKVLNFFKSSPISSYNKEIESRMQKVLDKLDTLLSQRGNLGLKTVRVVGSGLSNELPQKSQTTSLVVGTDIYGRDDDKKQIVDWLISDTNNSNQPSILSIVGMGGVGKTTLAQHVFNDPNVDEAKFDVKAWVCVSDEFDVFKVSRAILEAITKSTDDSRDLEMVHTRLKEQLTKKKFLLVLDDLWNENKPKWEELQKPLMFGVQGSKIIVTTRSKEVASTMRSEVHSLKQLQEDDCWNLFVKYAFKDDDTQQNLECTEIGKKIVEKCKGLPLALKTMGSLLYNKSSVSEWESVFQNEIWEFSQERCDIIPALALSYIHLPSHLKVCFAYCALFPKDYEFKKEHLMHLWMTENLLHYPSENFCKQYFNDLLSRSFFQQSGEKEEVFVMHDLLNDLAKYVGGGIYFRWEVNQEGKIQKVTRHFSVEVGYNQYFDGFGTSCNTKRLRTFMSTGLGKLKNLKVVMESFNVGHGREFGIQQLGELNLDGSLSIKALENIENSVDASEAYLKNKTLLVKLKLRWTRNRDSIDSKKEEEVIKNLQPSENLKELVILHYGGKEFPNWLHSLLNLVSLELNGCDSCERLPPLGLLPFLEDLNIIGLDGIVSIDADFYGSNSSSFKSLQNLRFFNMGQWKKWECKAGIFPNLQTLYISDCPKLKGELPEQLVPLKKYKLQSANYLRLPLQEL 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00161 792 Gene3D - 165 340 IPR027417 -
Viun11g00161 792 SUPERFAMILY L domain-like 497 776 - -
Viun11g00161 792 Coils Coil 41 61 - -
Viun11g00161 792 PRINTS Disease resistance protein signature 671 687 - -
Viun11g00161 792 PRINTS Disease resistance protein signature 377 391 - -
Viun11g00161 792 PRINTS Disease resistance protein signature 281 295 - -
Viun11g00161 792 PRINTS Disease resistance protein signature 207 222 - -
Viun11g00161 792 Gene3D - 425 507 IPR036388 -
Viun11g00161 792 FunFam Probable disease resistance protein At5g66910 340 425 - -
Viun11g00161 792 Gene3D Ribonuclease Inhibitor 546 783 IPR032675 -
Viun11g00161 792 Pfam Rx N-terminal domain 11 97 IPR041118 -
Viun11g00161 792 Gene3D - 16 123 - -
Viun11g00161 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 440 IPR027417 -
Viun11g00161 792 FunFam Probable disease resistance protein At1g61300 164 336 - -
Viun11g00161 792 Coils Coil 126 146 - -
Viun11g00161 792 Gene3D - 341 424 IPR042197 -
Viun11g00161 792 Pfam NB-ARC domain 185 405 IPR002182 GO:0043531
Viun11g00161 792 PANTHER DISEASE RESISTANCE PROTEIN RP 41 760 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00161 Viun-Chr11 1313767 1316644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00161 208 404 WRKY Transcription Factor Family AT5G45050 28.436 1.11e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00161 - - vun:114168736 1551.18