Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00158 ATGGCCTTAGAATTTGTCGGTGGTGCACTTCTTTCTGCTTTTCTTCAGGTTGCATTCCAGAAGTTAGCTTCCCCTCAAATTCTCGATTTCTTTCGTGTAAGAAAGCTTGATCAAAAGCTGCTATTCAAGTTGGAAACAAAGCTGCACTCCATCCATTCTCTGGCTGATGATGCAGAACGAAAGCAGTTCACGTATTCACATGTCAGAAGCTGGTTACTTAAGGTCAAAGATGCTGTCCTTGACGCAGAGGATCTCTTGGATGATATACAAATGCTCTCCAAAAGAGAATTGGATGCTGAAACTGAATCTCAAGTCTTTACGGGCTGTACTTGCAAGGTATTCAATTTCTTCAAATCTTCTTCAATTAGTTCTCGTAACAAGGAAATCGAGTCCAGGATGGAAGAAATCCTTGAAATCTTAGAATTTCTCTCAAACCAAAAGGGTGCTCTAAGATTGAAAACTGCTAGTGGTGTTAGATCTGGGTTGAGCAATGAACTGCCACAAAAATCACAAACAACATCGTCGGTTGTTGGAACCGATATTTATGGCAGAGATGATGATAAAAAACAGATCGTTGACTGGTTGATATCTGACAACAACAATTCTAACCAGCCATCAATACTTTCTATTGTGGGAATGGGCGGGCTGGGTAAGACCACACTTGCCCGACATGTATTCAGTGACCCAAGGATAAACAAGGCTAAATTTGATGTCAAAGCTTGGGTTTGTGTTTCAGCTGAATTTGATGTTTTTAAAGTATCAAAAGTAATTCTTGAGGCTGTTACTAAATCAACTGATGATAGTGGAAATTTAGAGATGGTCCATACAAGATTAAAAGAAAATTTGACTGAAAAGAAATTTCTTCTCGTTTTGGATGATGTTTGGAACGAGAACCAATGTAATTGGGAAGAAGTGCATAAGCCCCTCATGTTTGGAGTCCAAGGGAGTAGGATTCTAGTCACTACACGTAGCAAGGAAGTTGCTTCTACCATGCGGTCAGAAATTCACTCCTTAAAGCAATTACAAGAAAATGATTGCTGGAACTTGTTTGTTAAATATGCTTTTAAAGACGATGATACTCAACAAAATCTAGAGTTCACAGAGATTGGCAAGAAGATAGTTGAAAAATGTAAAGGACTACCTCTTGCATTGAAGACAATGGGAAATCTATTATACAACAAATCATCTGTTTCAGAGTGGGAAAGTGTGTTCCAAAGCGAAATATGGGAATTTTCACAAGAGCGTTGTGATATTATCCCTGCTTTAGCAGTGAGCTATATCCACCTTCCTTCCCATCTGAAGGTCTGCTTTGCTTATTGTGCCCTGTTTCCCAAGGATTATGAGTTTAAGAAGGAGCATTTGATGCACTTGTGGATGACTGAAAATCTCCTACAATGTCCTTCAGAAAAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGATCCTTCTTCCAACAATCAGATGAAGAGGAAGAAGTATTTATGATGCATGACCTTCTAAATGATTTAGCAAAGTATGTTGGTGGAGGCATATACTTTAGGTGGGAAGTTGGTCAAAAAGAGAAGATACAAAAAGTAACTCGTCATTATTCAGTTGAACTTGGACACAATCAATATTTTAATGGGTTTGAAACCCCATGTAACACAAAAAGGTTACGTACATTTATGCTAACAAGTAGGGGAATTGATCCTTTCACTCGTTGGGGTGCCAATATGTCGATACATGAATTTTTTTCCAAGTTTAGGCTTTTACGAATTTTATCTCTGTCTTGTTGTGACATTAAAGAGCTGCCTGACTCTGTTGCCAATCTTGAGCATCTCCAACTGTTAGACCTCTCATTTACTGTACTAAAAACACTTTCTGAAAAGATATGTTCACTCTGCCACTTGCAAATACTGAAGTTGAACTATTGTAGGTATTTGGAGGAGTTGCCTTCAAATTTGCATTTACTCACCAGTTTGTGTCACCTTGAATTGATATCGAATAATTTGAAAAAGTTGCCGCCGAGTTTGGGAAAACTGAAGAATCTTAAAGTAGTCATGGAATCCTTTAATGTTGGTCGTGGCGGGGAGTTCAGTATTCAACAGCTAGGAGAACTCAACCTTGATGGAAGTCTATCAATTGGGGAGCTACAAAATATTGAAAATTCAGTGGATGCATTAGAAGCATATTTGAAGAATAAAACACTCCTTGTAAAGCTAAAGTTGCAATGGAGACGGAATAGAGACTCTATTGATTCGAAGAAAGAAGAGGAGGTAATTAAGAATCTGCAACCTTCCAAAAATTTAAAGGAGTTGTCAATCTTAAACTATGGTGGGAAACAATTTCCAAACTGGTTACATTTATTATCGAACCTGGTGTCCTTAGAGTTGGATAGATGTAAATCTTGCGAACGCTTACCTCCCCTTGGACTTTTGTCGAATCTGAAGGACTTGATTATTCATAGACTTGATGGGATAGTGAGCATTGATGCTGATTTTTATGGGAGCAACTCTTCTTCATTTAAGTCCCTGCAAAGTTTGACGTTCGCCAATATGGGGCAATGGGAAAAATGGGAATGCAAAGCAGGTGGTTTTCCAAATCTTCAAACACTTTATATAAGTGATTGTCCCAAGCTGAAAGGAGAGTTGCCAGAGCAACTTGTTCCTCTGAAAATATTACATATTACACACTGCGAACAACTTGAGGCTTCCGCTCCCAAGGCTCTAGATTTAATTGCTGTATATTGTGGAAAGCTACATTTGGACTGGGCTACCATGAAAAGTCTCATGATGCAAGCACCATTGCTGGAAATAGTTTGGTCTAACACTGTTGAATATTTGCACATTAACTGGATGTCAATAAGTGATGATTGTGTCGCTGGAAGGATCTTTTCATTGGATTCCCTCCCAAGACTCAGGGAGTTGTATCTCGGTAGGTTTCCTAATCTGGAGATGATTTCACAGGATCATGTTCACGATCATCTCGAGGGTATGACAATCGTAGAGTGCCCTAAATTTGAATCACTGCCTGCAAACATGCATACATTGCTTCCATCTCTCAATGAGCTACACATAGGAGACTGTCCAAAACTTGAGTCGTTTCCTGAGGGAGGTTTGCCATCAAATTTAAAATTTATGAAACTCAATAATTGCTCCAGACTAGTTGTTGGCTCACTGAAAGGAGCATTCAGAGACGATCCGTCTCTGAAAAGATTGTCCATTGAAAAAGTGGATGTAGAATGTTTTAGTGATGAAGGTGTGTTTCCACTCTCTCTTACTGAACTATACATCCGTGATTGTCCAAATCTAGAAAAATTGGATTACAAGGTTTCTCAACTCTCATCTCTTAAATCATTGACTCTTTCTATCTGTCCCAACCTCCAATGCTTACCAGAGGAGGGTCTTCCTTCATCAATTTCAGATCTTCATATAATCAGTTGTCCTTTGCTCAAACAACGTTACCAGAAAGGAAGTGAGGATTGGGAAAAGATTGCTCACATTCAAAATCTGCTTATAGAGTAG 3507 0.3881 MALEFVGGALLSAFLQVAFQKLASPQILDFFRVRKLDQKLLFKLETKLHSIHSLADDAERKQFTYSHVRSWLLKVKDAVLDAEDLLDDIQMLSKRELDAETESQVFTGCTCKVFNFFKSSSISSRNKEIESRMEEILEILEFLSNQKGALRLKTASGVRSGLSNELPQKSQTTSSVVGTDIYGRDDDKKQIVDWLISDNNNSNQPSILSIVGMGGLGKTTLARHVFSDPRINKAKFDVKAWVCVSAEFDVFKVSKVILEAVTKSTDDSGNLEMVHTRLKENLTEKKFLLVLDDVWNENQCNWEEVHKPLMFGVQGSRILVTTRSKEVASTMRSEIHSLKQLQENDCWNLFVKYAFKDDDTQQNLEFTEIGKKIVEKCKGLPLALKTMGNLLYNKSSVSEWESVFQSEIWEFSQERCDIIPALAVSYIHLPSHLKVCFAYCALFPKDYEFKKEHLMHLWMTENLLQCPSEKVCQQYFNDLLSRSFFQQSDEEEEVFMMHDLLNDLAKYVGGGIYFRWEVGQKEKIQKVTRHYSVELGHNQYFNGFETPCNTKRLRTFMLTSRGIDPFTRWGANMSIHEFFSKFRLLRILSLSCCDIKELPDSVANLEHLQLLDLSFTVLKTLSEKICSLCHLQILKLNYCRYLEELPSNLHLLTSLCHLELISNNLKKLPPSLGKLKNLKVVMESFNVGRGGEFSIQQLGELNLDGSLSIGELQNIENSVDALEAYLKNKTLLVKLKLQWRRNRDSIDSKKEEEVIKNLQPSKNLKELSILNYGGKQFPNWLHLLSNLVSLELDRCKSCERLPPLGLLSNLKDLIIHRLDGIVSIDADFYGSNSSSFKSLQSLTFANMGQWEKWECKAGGFPNLQTLYISDCPKLKGELPEQLVPLKILHITHCEQLEASAPKALDLIAVYCGKLHLDWATMKSLMMQAPLLEIVWSNTVEYLHINWMSISDDCVAGRIFSLDSLPRLRELYLGRFPNLEMISQDHVHDHLEGMTIVECPKFESLPANMHTLLPSLNELHIGDCPKLESFPEGGLPSNLKFMKLNNCSRLVVGSLKGAFRDDPSLKRLSIEKVDVECFSDEGVFPLSLTELYIRDCPNLEKLDYKVSQLSSLKSLTLSICPNLQCLPEEGLPSSISDLHIISCPLLKQRYQKGSEDWEKIAHIQNLLIE 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00158 1168 FunFam Probable disease resistance protein At1g61300 164 336 - -
Viun11g00158 1168 PRINTS Disease resistance protein signature 782 798 - -
Viun11g00158 1168 PRINTS Disease resistance protein signature 281 295 - -
Viun11g00158 1168 PRINTS Disease resistance protein signature 207 222 - -
Viun11g00158 1168 PRINTS Disease resistance protein signature 377 391 - -
Viun11g00158 1168 Gene3D - 16 126 - -
Viun11g00158 1168 Gene3D - 166 339 IPR027417 -
Viun11g00158 1168 Gene3D Ribonuclease Inhibitor 912 1166 IPR032675 -
Viun11g00158 1168 Pfam Rx N-terminal domain 11 97 IPR041118 -
Viun11g00158 1168 Gene3D - 425 507 IPR036388 -
Viun11g00158 1168 SUPERFAMILY RNI-like 859 1145 - -
Viun11g00158 1168 PANTHER DISEASE RESISTANCE PROTEIN RP 59 871 IPR044974 GO:0006952
Viun11g00158 1168 Coils Coil 126 146 - -
Viun11g00158 1168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 440 IPR027417 -
Viun11g00158 1168 Gene3D Ribonuclease Inhibitor 545 909 IPR032675 -
Viun11g00158 1168 SMART LRR_typ_2 582 604 IPR003591 -
Viun11g00158 1168 SMART LRR_typ_2 605 628 IPR003591 -
Viun11g00158 1168 SMART LRR_typ_2 652 675 IPR003591 -
Viun11g00158 1168 Gene3D - 340 424 IPR042197 -
Viun11g00158 1168 Pfam NB-ARC domain 185 405 IPR002182 GO:0043531
Viun11g00158 1168 SUPERFAMILY L domain-like 497 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00158 Viun-Chr11 1299310 1303025 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00158 208 404 WRKY Transcription Factor Family AT5G45050 29.524 7.73e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00158 - - vun:114170078 1551.95