Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00125 ATGATAACAACAATGTCACATTCCTCAACCCTAGTTCTTCTTCTTCTTCTGTCTCTTCACAGCATCACTTTCTCAGAGGCTCTCAAAGGAGGGTTCAGTGTGGAAATCATCCACCGTGACTCATCAAAATCACCCTTTTACAGTTCCACAGAGACCCAATTCCAACGAGTCGCTAATGCAGTGCGTCGTTCCATTAATCGTGCCAATCATTTCAACAAGAACACACCTAAGACCAATTTAACACAAAACGATGGTGAGTACCTTCTGAGCTATTCAATCGGAACACCACCGTTTCATGTTTATGGGATTGCTGATACAGGAAGTGACATGATTTGGTTGCAGTGTAAACCTTGTAAAACCTGTTACAACCAAACCACACCAATGTTTGATCCTTCAAAATCCAGCACATACACAACCCTTCCTTACTCTTCCAAAACATGTAAATCAGTGCAAGATACCTCTGCAGGTGGAGACAATTGTGAATATACCATTTCCTATGGTGATGGGTCACTGTCACAAGGGGATCTTAGTGTGGAGACCCTCACTTTAGACTCCACCAATGGCTCTTCAATCCAATTTCCCAGAACTGTGATAGGATGTGGAAGAAACAACACTGTGTCCTTTGAGGGAAAGGGCTCTGGTGTAGTTGGCCTTGGGAGAGGACCTGTGTCCTTTATATCTCAATTGGGTTCTTCAATTGGTGGAAAATTTTCCTACTGTTTGGCACCAATGACTAATGCTTCTAGCAGACTCAATTTTGGAGATGCTGCAGTGGTTTCTGGGAAAGGGACTGTGTCAACTCCAATACTCTCACTTGGACCAGTATTTTACTACCTAACATTGGAAGCATTCAGTGTGGGAAACAAGAGAATAGGGTTTGGAAGATCTGAATCTGAATCTGAATCTGATGGAGAGGGAAACATCATAATTGACTCAGGTACAACACTCACTCTTTTGCCAGAAAATGTTTACTCAAAGTTGGAATCAGCAGTGGCAGATGCAATTGAATTGGATCGTGTGAAGGATCCAACTAAGCAGTTGAGCCTCTGCTATGAAAGCAGTTTTGGTGATCTGAATGCACCAGTGATTATGGCACATTTTAGAGGTGCAGATGTGAAGTTGAATGCTGTGAACACATTTGTTGAAGTGGAAGAAGGAGTAGTGTGCTTGGCTTTCATGTCAAGTAAACTTGGTGCCATCTTTGGGAATTTGGCTCAGATAAACCTTTTGGTTGGCTATGACCTAGAAAAGAAAATAGTCTCCTTCAAACCCAAAGACTGTACTAACCAGTGA 1293 0.4238 MITTMSHSSTLVLLLLLSLHSITFSEALKGGFSVEIIHRDSSKSPFYSSTETQFQRVANAVRRSINRANHFNKNTPKTNLTQNDGEYLLSYSIGTPPFHVYGIADTGSDMIWLQCKPCKTCYNQTTPMFDPSKSSTYTTLPYSSKTCKSVQDTSAGGDNCEYTISYGDGSLSQGDLSVETLTLDSTNGSSIQFPRTVIGCGRNNTVSFEGKGSGVVGLGRGPVSFISQLGSSIGGKFSYCLAPMTNASSRLNFGDAAVVSGKGTVSTPILSLGPVFYYLTLEAFSVGNKRIGFGRSESESESDGEGNIIIDSGTTLTLLPENVYSKLESAVADAIELDRVKDPTKQLSLCYESSFGDLNAPVIMAHFRGADVKLNAVNTFVEVEEGVVCLAFMSSKLGAIFGNLAQINLLVGYDLEKKIVSFKPKDCTNQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00125 430 SUPERFAMILY Acid proteases 82 427 IPR021109 -
Viun11g00125 430 CDD pepsin_A_like_plant 86 427 IPR034161 -
Viun11g00125 430 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 308 319 IPR001969 GO:0004190|GO:0006508
Viun11g00125 430 PANTHER OS07G0603500 PROTEIN-RELATED 34 428 - -
Viun11g00125 430 FunFam Aspartic proteinase CDR1 256 430 - -
Viun11g00125 430 Pfam Xylanase inhibitor C-terminal 277 423 IPR032799 -
Viun11g00125 430 Gene3D Acid Proteases 254 430 IPR021109 -
Viun11g00125 430 FunFam Probable aspartic protease At2g35615 66 254 - -
Viun11g00125 430 Gene3D Acid Proteases 64 253 IPR021109 -
Viun11g00125 430 Pfam Xylanase inhibitor N-terminal 87 255 IPR032861 -
Viun11g00125 430 ProSiteProfiles Peptidase family A1 domain profile. 87 423 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00125 Viun-Chr11 880218 881722 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00125 85 427 Miscellaneous Gene Families AT1G77480 25.995 2.68e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00125 - - gmx:100790081 608.601