Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00106 ATGGGTGCCGTTTGTTGTGTTGCTGCCAAAGACAAAACTTTACAAAGTGCATCACCCAGTGACATCATACATCGGAATATTCGATATTCTCCAACTTGGAACTTTCGGTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACTGCAGTAACTTGGTTTTCTAATGGTATTAGCAGGAATGATGGACTGGAGAATAAAAATGAACTCTCGTATGCATCGGACGATGGAAGCCCGTTGCAGAATAATCAAAGGAATAGATGCCAAAAATCCGCAGTCTCAGAAGGAACTGCTAGGAACCTGATAAATTCACCTTCAGATCAAACTCTTTTAAGAAATGTCTCAACAAATGTGAGCATGGAACAGGCAAAGGGGTCGGCAGAATCATCAACATGCCCGGATCCCACAAAACCTCTACATTCATTGCCTTCTACTTCTTCATCAATATCACCTCAGCCATACGATAGTCACCCATTCCCATCCAGCTCAACCACTTCAAGGTGGTCTTGCCATTCCACAGGAGAGCAAGTATCTTATCAAGTTTCTGATAGCCAAACCTTGGGATATAAGACACCTGGCAACTCTTATGTATCTGAAGAGAGGCCAGTGTTGCCTTCATGGAGCAATGAATCTGGTATGCACTCCCATGGCGGGTCTTCAGGTAATTGGTCTAGGTCTGGTTTTTCTGAGCTGACAGGCAGTTCCTTCAAAGATAGATGGTCATTTGATAGTGAGACATTTGGTTTTAATTGTGAAAGGCTGGTTAGATCCAGTAGTCGGTTTTCAAATTCTCCAGTTGATTTACAAACATGTGGTGTTTGCTCAAAACTTTTAACTGAGAAGTCTTCTTTGGGCACCCAAAAGATAATTGCAAGTAATGACCTTTCTGTAGTTTCTGTCCTTATCTGTGGACATGTTTATCATGCTGAATGTTTGGAGTGTTTGACACCTGAAGTCAACAAGTATGATCCACTTTGTCCAGTTTGCACTTTTGGTGAGAAATATACTCTTAAATTGTCTGAAAAAGCTCTGAAAGCTGAAATGGATTTGAAGGCTAAAAATAAGAAATCAAGAAACCGAATTGTGGACAGTGATATTGACGATAATTCTGTTGTGCATGAACACTTTAGAGAAAAATGGCGTCAAGCTAGTAAAGGTCTTAGAATTGATTCTAGTTCTAGTGGGAGAAGCTCTAATGGGAAACCTTTTCTTAAGAGACATTTCTCATTTGGCTCAAGGAGTTCCAAATCCATGTTAGATAATCAGTCAAGCCGGAAGAAAGGCTTCTTTTGGGCAAAATCTAGCAGGGAATAA 1311 0.4104 MGAVCCVAAKDKTLQSASPSDIIHRNIRYSPTWNFRWDHRGRVAGEDTAVTWFSNGISRNDGLENKNELSYASDDGSPLQNNQRNRCQKSAVSEGTARNLINSPSDQTLLRNVSTNVSMEQAKGSAESSTCPDPTKPLHSLPSTSSSISPQPYDSHPFPSSSTTSRWSCHSTGEQVSYQVSDSQTLGYKTPGNSYVSEERPVLPSWSNESGMHSHGGSSGNWSRSGFSELTGSSFKDRWSFDSETFGFNCERLVRSSSRFSNSPVDLQTCGVCSKLLTEKSSLGTQKIIASNDLSVVSVLICGHVYHAECLECLTPEVNKYDPLCPVCTFGEKYTLKLSEKALKAEMDLKAKNKKSRNRIVDSDIDDNSVVHEHFREKWRQASKGLRIDSSSSGRSSNGKPFLKRHFSFGSRSSKSMLDNQSSRKKGFFWAKSSRE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00106 436 PANTHER EXPRESSED PROTEIN 1 333 - -
Viun11g00106 436 MobiDBLite consensus disorder prediction 63 223 - -
Viun11g00106 436 MobiDBLite consensus disorder prediction 409 428 - -
Viun11g00106 436 SUPERFAMILY RING/U-box 263 329 - -
Viun11g00106 436 CDD RING-H2 270 328 - -
Viun11g00106 436 MobiDBLite consensus disorder prediction 386 436 - -
Viun11g00106 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 330 IPR013083 -
Viun11g00106 436 ProSiteProfiles Zinc finger RING-type profile. 270 329 IPR001841 -
Viun11g00106 436 MobiDBLite consensus disorder prediction 200 223 - -
Viun11g00106 436 MobiDBLite consensus disorder prediction 63 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00106 Viun-Chr11 678971 683670 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00106 - - gmx:106795502 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00106 11 678971 683670 Viun11g00106 11 678971 683670 ECH