Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00074 ATGGTTGATCAGGTTCAGCACCCTAGAGTGATGGAGAAGGTTGCATGTCAGCTCCATCTTCGCACTGGTCTTCCACTGTACCAGCAGAGGCGATCTTTCCAGAACTACTCCAATGCTGCTCTCTCATTCCAGAAACACTCCAATGCAGCATTTCAGTATCCAATGGCACCACAATGCAGAGGCGCAATCGATCTCTCTGCCGTTGCACCATTCTCACCTGTGTTCGTTGCAGCTCCTGCTGAAAAGGGAAACTTCCTCATCGACTTTCTCATGGGTGGAGTTTCCGCTGCCGTCTCCAAAACCGCCGCTGCCCCCATTGAACGCGTCAAGCTCTTGATCCAGAACCAGGATGAGATGATCAAAGCCGGTAGACTCTCTGAACCCTATAAAGGTATCGGTGACTGCTTCAAGAGGACAATCAATGAAGAAGGCTTCGGTTCCCTATGGAGAGGTAACACCGCAAATGTCATCCGTTATTTCCCTACCCAGGCACTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAAGGATGGATACTGGAAATGGTTTGCTGGTAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTGCTTTTTGTCTACTCTCTTGACTACGCTCGTACCCGTCTCGCAAACGATGCCAAGGCTGCAAAGAAGGGTGGAGAAAGACAATTCAATGGCCTCGTTGATGTTTACAAGAAGACACTAGCTTCTGATGGCGTTGCCGGTCTCTACCGTGGCTTCAACATTTCCTGCGTCGGAATCATCGTCTATCGCGGCCTCTACTTCGGAATGTACGATTCCCTCAAACCGGTTCTCTTAACCGGCTCTCTCCAGGATAGCTTTTTCGCTAGCTTTGCTCTAGGATGGTTAATCACCAATGGTGCTGGTTTAGCTTCGTACCCAATTGATACAGTGAGGAGAAGGATGATGATGACATCTGGGGAAGCTGTGAAGTACAAGAGCTCCATGCATGCATTCACACAGATCCTTCAGAACGAGGGTGCCAAGTCCTTGTTCAAGGGTGCAGGTGCCAACATTCTTCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTGCAGGTCATTGTCTTTGGCAAGAAGTATGGCTCTGGTGGAGCTTGA 1158 0.4965 MVDQVQHPRVMEKVACQLHLRTGLPLYQQRRSFQNYSNAALSFQKHSNAAFQYPMAPQCRGAIDLSAVAPFSPVFVAAPAEKGNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTINEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMHAFTQILQNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00074 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 288 374 IPR018108 -
Viun11g00074 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 280 IPR018108 -
Viun11g00074 385 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 75 384 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g00074 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 176 IPR018108 -
Viun11g00074 385 Pfam Mitochondrial carrier protein 84 180 IPR018108 -
Viun11g00074 385 Pfam Mitochondrial carrier protein 187 283 IPR018108 -
Viun11g00074 385 Pfam Mitochondrial carrier protein 289 374 IPR018108 -
Viun11g00074 385 Gene3D Mitochondrial carrier domain 86 381 IPR023395 -
Viun11g00074 385 PRINTS Mitochondrial carrier protein signature 151 171 IPR002067 GO:0055085
Viun11g00074 385 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Viun11g00074 385 PRINTS Mitochondrial carrier protein signature 297 319 IPR002067 GO:0055085
Viun11g00074 385 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Viun11g00074 385 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Viun11g00074 385 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Viun11g00074 385 PRINTS Adenine nucleotide translocator signature 293 309 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g00074 385 PRINTS Adenine nucleotide translocator signature 162 174 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g00074 385 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g00074 385 PRINTS Adenine nucleotide translocator signature 129 150 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g00074 385 PRINTS Adenine nucleotide translocator signature 188 201 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g00074 385 FunFam ADP,ATP carrier protein, mitochondrial 86 381 - -
Viun11g00074 385 SUPERFAMILY Mitochondrial carrier 83 370 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00074 Viun-Chr11 438291 440152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00074 1 385 Antiporters AT5G13490 79.442 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00074 K05863 - gmx:100793257 644.425