Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00062 ATGGCTCAGAAGGCGGAGAAAAACGACACCGATTTCAAGGTCCCGGAACCAATCACGCCCTGCGCCACCACTACCGCCGCTGCTGCAACTTCGATTTCCGAGCCTTCTAGATTCTTCGACGCTGTCACTCCGGCCACATCGTCGCGTTCGCCCAAGCGCTCGCTTCCCCAGGAGGACGCTGCCAGCGCGGACCGGACGGGGGCATCGGAGCCGAAGCGCGCGGTCAACAGGTGCTCGGGATGCCGGCGGCGCGTCGGACTGACCGGATTTCGTTGCCGGTGCGGTGACCTCTTCTGTGCGGAGCACCGGTACACCGACCGCCACGACTGCTCTTACGACTACAAGGCCGCCGGGAGAGAGGCCATCGCGAGGGAGAATCCCGTCGTGAAGGCCGCGAAGATCGTGAAGGTCTGA 414 0.6425 MAQKAEKNDTDFKVPEPITPCATTTAAAATSISEPSRFFDAVTPATSSRSPKRSLPQEDAASADRTGASEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYTDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00062 137 FunFam Zinc finger AN1-type containing 6 52 133 - -
Viun11g00062 137 Pfam AN1-like Zinc finger 78 115 IPR000058 GO:0008270
Viun11g00062 137 MobiDBLite consensus disorder prediction 39 55 - -
Viun11g00062 137 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Viun11g00062 137 MobiDBLite consensus disorder prediction 39 75 - -
Viun11g00062 137 SUPERFAMILY AN1-like Zinc finger 65 131 IPR035896 -
Viun11g00062 137 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
Viun11g00062 137 Gene3D - 46 133 IPR035896 -
Viun11g00062 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 39 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00062 Viun-Chr11 368569 369595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00062 50 137 C2H2 Transcription Factor Family AT3G52800 52.273 2.06e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00062 - - gmx:100794830 223.402