Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00050 ATGGCAAAGTCCAAGAACAATGCCAAGAAGTTGTCTTACATTTCAGTCCCTTCTCAGATCATCAACTCCATATCTTCCTCTTCTCTTCAATCTTTGCTAGAATCTCCCAAGAAATGTGCAAGACATTCAAAATTCTTCAGCTTTTTCAAGTGGGGTAGGCCAAGATTGTTCCTTTTCATTCTCTCTCTCCTCGCCTTCTTCACCATGCTCAAGCTGGGCTTCAATCTGGCCACCCCATTTTCTCCTTTCCCCTGTGCAACCTCAGTAGGCTTCTCAAAATCCCTCCCCGGAGGAGTAGTTTTATCACGGAAGAGTGGTGTTTTGGATGGTGGCGATGACACTGTTTCTGAGCCTCTGATTACCAGTGTGCAGTTACATGCACAGGTTCCGAGAGGGGTGGAAACTGGTGAAGAGATTGAAAAGAGTGAGTTTTGGGAGCAGCCAGATGGGTTAGGGTACAAACCTTGCTTAGGTTTCAGCCGGGAGTATAGGAGGCAGAGTGAGGGAGTTGTGAAGAACCGGAGGAGGTACCTCATGGTGGTGGTTTCTGGAGGGATGAATCAGCAGAGGAATCAGATTGTTGATGCCGTTGTCATTGCTAGGATTCTTGGGGCTGCTTTGGTTGTTCCTATATTGCAAGTCAATGTCATTTGGGAAGATGAAAGTGAATTTGCTGATATATTTGATTTGGAGCACTTCAAGAGTGTTCTTGCCAATGATGTGAGGGTGGTTTCAGCTTTGCCATCAACACATCTAATGACAAGGCCAGTGGAGGGAAGCCCTCCTCCTCATGCCACTCCCAGTTGGATTCGGTCACACTATCTCAGAAGATTCAACAGAGAAGGTGTCTTGCTTTTACGTGGACTGGATTCGAGGCTGTCAAAGGATCTTCCTCCTGATCTTCAGAAGCTTAGATGCAAGGTTGCTTTTGATGCATTGAGGTTTGCAAAGCCTGTTCAGGAACTTGGTAACAACATTGCTGAGAGAATGAAAAGCAAGGGACCTTACCTTGCTCTTCATCTACGGATGGAAAAGGATGTCTGGGTGAGAACTGGTTGTCTACCTGGTTTGAGTCCCGAGTATGATGAGATTGTAAAAACTGAGAGGATAAATAGGCCTGAGCTCTTAACTGCAAAATCAAACATGACATACCATGAAAGGAAGCTGGCTGGTCTCTGTCCCTTAAATGCTGTCGAGGTTACCAGGCTGCTTAAAGCTCTAGGAGCTCCAAAAAGTGCAAGAATTTACTGGGCTGGAGGACAACCATTAGGTGGTAAAGAGGCACTGCAACCACTAATCAATGAGTTTCAAAATCTTTACAGCAAGGAAGATCTTGCATTACCTGAAGAACTAGAACCATTTGCAAATAAAGCTTCCCTAATGGCTGCCATAGATTACATAGTCTCTGAGAAGAGTGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCAATTCAGGGTCACAGGGCTTATGCAGGTCACAAGAAATATATAACACCAAACAAAAGACATATGCTACCCTATTTTCTGAACTCTTCCCTCCCTGAAGAAGAGTTCAACAGAATCATCAAGGAACTGCATCAAGACTCATTAGGTCAGCCAGAACTCAGGACTAGCAAGGCTGCAAGAGATGTCACTAAATATCCTATTCCTGAGTGCATGTGCAATGACTCATAA 1683 0.448 MAKSKNNAKKLSYISVPSQIINSISSSSLQSLLESPKKCARHSKFFSFFKWGRPRLFLFILSLLAFFTMLKLGFNLATPFSPFPCATSVGFSKSLPGGVVLSRKSGVLDGGDDTVSEPLITSVQLHAQVPRGVETGEEIEKSEFWEQPDGLGYKPCLGFSREYRRQSEGVVKNRRRYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWEDESEFADIFDLEHFKSVLANDVRVVSALPSTHLMTRPVEGSPPPHATPSWIRSHYLRRFNREGVLLLRGLDSRLSKDLPPDLQKLRCKVAFDALRFAKPVQELGNNIAERMKSKGPYLALHLRMEKDVWVRTGCLPGLSPEYDEIVKTERINRPELLTAKSNMTYHERKLAGLCPLNAVEVTRLLKALGAPKSARIYWAGGQPLGGKEALQPLINEFQNLYSKEDLALPEELEPFANKASLMAAIDYIVSEKSDVFMPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPYFLNSSLPEEEFNRIIKELHQDSLGQPELRTSKAARDVTKYPIPECMCNDS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00050 560 CDD O-FucT_plant 177 498 IPR024709 -
Viun11g00050 560 PIRSF UCP009360 20 560 IPR024709 -
Viun11g00050 560 PANTHER OS02G0726500 PROTEIN-RELATED 79 558 - -
Viun11g00050 560 Pfam GDP-fucose protein O-fucosyltransferase 177 493 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00050 Viun-Chr11 273942 277151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00050 10 560 Miscellaneous Gene Families AT3G07900 64.965 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00050 - - vun:114169624 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00050 11 273942 277151 Viun11g00050 11 273942 277151 ECH