Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00042 ATGGCTTCTGTGCAGATCCTGTGTGCATGCACAAGTAGTAGCCAGGTTCAACACCAGGGTTCGATCAGATACAGATATGGATACCCCAGTGAGAAGATGAATGAAAAAAGGTGTTCAGTCAGAGTTGAAGGTGGGAATGGAATGGTTCTTTCAAGTTCAGAGGAAGAGAAGAGAAAGCTGAGAGTGTTGGTGGCTGGTGGAGGCATTGGTGGCCTTGTTCTGGCTCTGGCTGCAAAGCACAAAGGGTATGCAGTGAAAGTGTTTGAGAAGGATTTGAGTGCTGTTAGAGGGGAAGGTAGGCACAGAGGCCCAATTCAACTCTTGAGCAGTGCCCTTGCTGTGTTGGAAGCCATTGATCAGAGTGTTGCATGGCAGATAATGGAGGCTGGCTGTGTCACTGCCAATAGGACTAATGGCCTTGCTGATGGTCTATCTGGAGAGTGGTTCGGTGAGTTTGATCTTTTGACTCCTGCTTCAAGGAAAAGGCTTCCTCTTACCCTAGTCATATGTAGGATGACACTGCAAGATATATTAGTGAATGCAGTTGGTCCAAACATACTAAGAAACAAATCTAAAGTTGTGGATTTTATTCAGGAACCTAGCAAGGTTAGAGTGATCCTTGAAAATGGTGAGCAACATGATGGTGATATCTTAATAGGAGCAGATGGAATATGGTCAGAAGTTCGTTCGAAACTCTTTGGGCGCCAAGAAGCAAATTACTCAGGTTTCACATGCTATAGTGGATTAACAAGTTATGTACCACCATATATTGATACAATTGGGTATCGGGTGTTCTTGGGCATGAACCAGTACTTTGTTGCTTCAGATGTTGGCCATGGAAAGATGCAATGGTATGCTTTCCACGGGGAACCCCCTTCAAATGTCCCTTTCCCAGAAGTTTCAGCAGGTAAGAAGAAGAGGATTTTGGATCTCTTTGGTAATTGGTGCAATGAAGTGATTGCACTCATATCAGAAACACCAGAGAATATGATTCTGCAGAGGGATATATATGACAGAGACATGATAAACACTTGGGGAATTGATAGAGTGACTTTGTTGGGTGATGCAGCTCATCCAATGCAACCAAATCTTGGTCAAGGGGGTTGCATGGCAATAGAGGACTCTTACCAATTGATACTTGAGCTTGACAAGATTTCTGAACATGACCCTGATGAGTCTGAAGTTATCTCAGCCCTTAGAAGATATGAGAAGAAAAGAATTCCAAGAGTAAGGGTGCTACACACAGCTAGCAGAATGGCATCAAAAATGCTAGTCAACTATCAACCCTACATTGAATTTAAATTTTGGCCCCTTTCAAATAATATAACAAATATGCAGATAAAGCACCCTGGAATTCATGTGGCTCAAGCCCTTTTCAAGTTCACTTTTCCACAGTTTGTTACTTGGATGATGGCAGGACATGGGCTGTGGTGA 1434 0.4324 MASVQILCACTSSSQVQHQGSIRYRYGYPSEKMNEKRCSVRVEGGNGMVLSSSEEEKRKLRVLVAGGGIGGLVLALAAKHKGYAVKVFEKDLSAVRGEGRHRGPIQLLSSALAVLEAIDQSVAWQIMEAGCVTANRTNGLADGLSGEWFGEFDLLTPASRKRLPLTLVICRMTLQDILVNAVGPNILRNKSKVVDFIQEPSKVRVILENGEQHDGDILIGADGIWSEVRSKLFGRQEANYSGFTCYSGLTSYVPPYIDTIGYRVFLGMNQYFVASDVGHGKMQWYAFHGEPPSNVPFPEVSAGKKKRILDLFGNWCNEVIALISETPENMILQRDIYDRDMINTWGIDRVTLLGDAAHPMQPNLGQGGCMAIEDSYQLILELDKISEHDPDESEVISALRRYEKKRIPRVRVLHTASRMASKMLVNYQPYIEFKFWPLSNNITNMQIKHPGIHVAQALFKFTFPQFVTWMMAGHGLW 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00042 477 Gene3D - 61 442 IPR036188 -
Viun11g00042 477 PANTHER - 53 475 - -
Viun11g00042 477 Pfam FAD binding domain 341 411 IPR002938 GO:0071949
Viun11g00042 477 SUPERFAMILY FAD/NAD(P)-binding domain 60 432 IPR036188 -
Viun11g00042 477 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Viun11g00042 477 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 214 229 - -
Viun11g00042 477 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 347 362 - -
Viun11g00042 477 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 362 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00042 Viun-Chr11 234310 238712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00042 55 374 Miscellaneous Gene Families AT4G38540 25.581 3.52e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00042 K09838 - gmx:100778602 822.772