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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Viun11g00040
ATGTCGCATCGGAAGTTTGAGCACCCCAGGCACGGTTCCCTTGGCTTTCTCCCAAGGAAGCGAGCTTCTCGTCACCGTGGAAAGGTGAAGTCTTTCCCTAAAGACAATCCTAGTCAACCATGCAGGTTGACTGCCTTTGTGGGCTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTTGAGAAACCAGGATCAAAACTTCATAAGAAAGAAACATGTGAAGCTGTCACTATCATTGAAACTCCTCCGTTGGTTGTTGTTGGAGTTGTGGGATACGTGAAGACACCACGTGGCCTTCGTACACTCAATACTGTTTGGGCTCAGCATCTAAGTGAAGAAGTCAGGAGACGGTTTTATAAGAATTGGTGCAAATCTAAAAAGAAGGCTTTTACCAAATACACAAAGAAGTATGAAACGGAGGAAGGGAAGAAAGATGTTGAATCTCAGCTTGAGAAACTGAAGAAGTATTCAACTGTCATTCGCGTTCTTGCTCATACTCAGATAAGGAAGTTGAGGGGTCTGAAACAGAAGAAAGCACATTTGATGGAGATCCAAGTTAATGGTGGAACAGTATCACAGAAGGTGGATTACGCATACAGCTTCTTTGAGAAGCAAATCCCAGTGGATGCAGTTTTTCAGAAAGATGAGATGATTGATATCATTGGTGTGACTAAGGGTAAGGGTTATGAAGGTGTTGTGACTCGTTGGGGTGTTACTCGACTCCCTCGCAAGACTCACAGAGGTCTGAGGAAGGTTGCTTGTATTGGTGCCTGGCACCCTGCCCGTGTTTCTTTCACTGTTGCCAGGGCTGGTCAGAATGGTTATCATCATCGAACTGAGTTGAATAAGAAGATTTACAAAGTTGCCAAGACTGGCCAAGAGTCACATACTGCCATCACTGAGTTTGACAGGACTGAGAAGGATATTACGCCTATGGGTGGATTCCCACATTATGGTGTTGTGAAGGATGATTACATTATGGTGAAGGGATGCTGTGTTGGACCCAAGAAGAGGGTTCTCACTCTTCGTCAATCCCTTCTCAAACAGACATCTCGGGTGGCTTTGGAAGACATCAAACTCAAGTTCATAGACACCTCATCCAAGTTTGGACATGGCCGATTCCAGACCACTCAGGAGAAACAAAAGTTTTATGGTCGATTGAAGGCATAA
1170
0.4504
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKSFPKDNPSQPCRLTAFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYTKKYETEEGKKDVESQLEKLKKYSTVIRVLAHTQIRKLRGLKQKKAHLMEIQVNGGTVSQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKTGQESHTAITEFDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVLTLRQSLLKQTSRVALEDIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA
389
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Viun11g00040
389
MobiDBLite
consensus disorder prediction
1
37
-
-
Viun11g00040
389
ProSitePatterns
Ribosomal protein L3 signature.
212
235
IPR019926
-
Viun11g00040
389
FunFam
60S ribosomal protein L3
1
77
-
-
Viun11g00040
389
Gene3D
-
83
207
-
-
Viun11g00040
389
Pfam
Ribosomal protein L3
1
370
IPR000597
GO:0003735|GO:0005840|GO:0006412
Viun11g00040
389
FunFam
60S ribosomal protein L3
83
207
-
-
Viun11g00040
389
FunFam
60S ribosomal protein L3
44
138
-
-
Viun11g00040
389
Gene3D
Ribosomal protein L3, domain 3
1
274
IPR044892
-
Viun11g00040
389
Gene3D
Translation factors
44
385
-
-
Viun11g00040
389
FunFam
Ribosomal protein L3
265
389
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Viun11g00040
Viun-Chr11
227285
230592
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Viun11g00040
1
386
Cytoplasmic Ribosomal Protein Gene Family
AT1G61580
85.233
0.0
695
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Viun11g00040
K02925
-
gmx:100792174
740.339
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