Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00030 ATGGAGGCGGAGCCCGCGGCTGGGCCCGGGCCTGAGTTTAATTCGAAGGAGGAAGCTTTCGCATTCTACCAAGCCCACGCGAAATCTGTGGGTTTCTCCGCCATAATCAAAGCCAGCCGCCGATCCCGGATCTCCGGCAACTTCATCGACGCCAAATTCGCCTGCACTCGCTACGGCGCCCCACCAAGCCACAAGCCCAAACGGGCCCCTGCCCGGGCCAAAACCGATTGCAAGGCCTCCATGCACGTGAAACGAACACCCCACGGTACATGGATCATCTCTTCTTTCATCAAACACCATAACCACCAAATTTCCCCCATTCACAGTAACCCTAAACCCAATAATAATGTTAACAACAACGCAAGTCCTTCAAGGAAACTCAAGGTTAAAAAAACACTGCAACACTTACCTTTCGCCCAAGGTGACCTTCAATTTTTGCTCAACGCTTTCATGTCTATGCAGAATGAAAACCCTAATTTCTTTTTCGCGGTCGATTTTAACGAGGAACAGCGGTTGAGGAGTGTTTTCTGGGTGGACGCTAAGGCTAGGCTTGATTACAGACACTTTAGCGATGTGGTGCTTTTGGACACCACTCACGTTAAAAACGAGTGTAGATTGCCCTTTGTTCCGTTTGTTGGTGTGAATCACCATCTTCAGTTTTTGTTGCTGGGATTGGCGTTTGTGTCTGATGGGTCTGAATCCACGTATGTGTGGCTGATGAGGAATTGGTTGAGGGCAATGGGAGGACGTGCTCCAAAGGTGATGCTCACTGACTGTGATGAAGTGCTGAAGAGAGCGGTTGCTCAAGTGGTTCCTGAGTCTTGTCATTGCTTTTGTCTGTGGCATGTGTTGAGTAAGGACAAAGGAGCAGTTTGA 876 0.4954 MEAEPAAGPGPEFNSKEEAFAFYQAHAKSVGFSAIIKASRRSRISGNFIDAKFACTRYGAPPSHKPKRAPARAKTDCKASMHVKRTPHGTWIISSFIKHHNHQISPIHSNPKPNNNVNNNASPSRKLKVKKTLQHLPFAQGDLQFLLNAFMSMQNENPNFFFAVDFNEEQRLRSVFWVDAKARLDYRHFSDVVLLDTTHVKNECRLPFVPFVGVNHHLQFLLLGLAFVSDGSESTYVWLMRNWLRAMGGRAPKVMLTDCDEVLKRAVAQVVPESCHCFCLWHVLSKDKGAV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00030 291 Pfam MULE transposase domain 192 285 IPR018289 -
Viun11g00030 291 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 285 IPR031052 GO:0006355
Viun11g00030 291 Pfam FAR1 DNA-binding domain 22 105 IPR004330 -
Viun11g00030 291 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00030 Viun-Chr11 203108 204066 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun11g00030 MULE 8.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00030 - - vun:114169363 589.341