Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00025 ATGGATGCCACTCACTCCATGTTCTGCAACAATGATCTGGTTAACCCCCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTCGTGTCACATATCTTCAACGTTGTCTTTAGGACTGTGGGTCAACCTGGACCAATTGCGCAGATTCTGGCTGGGTTGGCGCTAGGTCCAATGTCACACATTCCGTATATTAAGGCTACATTTTTTCCTGCTAGTTCAATAAACTACTATGAAGTTGTGAGCTTCTTCTGTCGCATACATTTCATGTTTTTGTTTGGGTTAGAGATGAATATGCACTACGCAATGCGCAATCTGCGTAGGGTGAACTTTGTAGCCTGTGGTGGTGCCCTGATGGGTGCTGTTTTTGGTCTATCTGTCTCATTTTACTTGCATCAAGAGTTGAACACCCTTGACAATGCCCCTTTGTATTATTTTTCAATGATCATCATGCTAGTGGTGTCATACACAAGCTCCCCAATGGTGATTCGTTTGGCAGCAGAGTTGAGGTTTGCAGCATCAGACGTGGGGCGAACGGCAGTGTCATCTGCGTTGATCACAGAAATGGGGTGCTTGTTGCTCTTCAATGTGATGGTTAACTGGAGAAAAGCAAATCACATTTCTTCTGGTTTAGGTTGCTTTGTAATCACTGTGTTCGTGGTTTACGTTAACCGGCACTTGGCAGTTTGGTTAAACGCAAGAAACAGAAACCAGAAGTACCTCAAGGCTCCTGAGTTGTTACTCATTCTGTTCATTCTTCTGACTAGCTCAATGATAATAGAGATTTGTGGTTACAACAGTATTATGAGTTGTTTCATCATTGGTTTGTTGTTCCCCAAGGAAGGGAAAACAGCTAGAACATTGCTGCACAAACTTGGTTATTCTATTTACAACTTTGTGCTTCCGGTGTATTTTGGCTACTTGGGGTTGCAGTGTGACCTGATAAATGTCTTCAAGAGCTTGCAGCGTGTGGCCAATATGGCCATACTGATATTATTGAGCATTGGAAGCAAGCTCGGTGGAACTCTTATAGCTTCCCGCTACCTCAAAATTCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCCGACCTTCTATTCATTGGTGCAGCAGCAAAGCAAGTAATTGTGAAAGCGTACAATGTTCTGTTGGTATCAATAGTACTTAACACAATAATATCAGGAATGATTGTGGCTTTTCTAGTGAGAGGGGAAGACAAAATGTTTGCAAACAACTACACTGCAATTGAACCACAACAAATGGAAGATGAGCTTCGAATTCTGGCTTGTGTATATGACCCTCGTCAGGTATCTGCCATACTTGCAACAGTGCTAGCAGTACATGGGTCTAGAGTATCACCATCTACCACTTACTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCCAACCTGTTGTACCATGAGAAAGAAAATGCTGACCTTAGCGACGATGAGGACTATGGGGGCAATGATGTGGTGGAAATCAACAATTCTTTGGATTCATTCACTGCAGAAACAAAGATTCTAGTCCACCAAAGAAGGGCAGTGTCTTCTTTCCCCTCCTTGTACGAAGATGTGTGCAATGAAGCAGAAGATCTGCAAGTGTCAATTGTGCTACTCCCCTTCCACAAGCACCAACGCATTGATGGGAAATTGGAAAGTGGAAAAGAGGGTATAAGGATCACCAACCAGAAGGTGCTAAGACATGCCCCTTGTTCAGTAGGTGTCATAGTGGAAAGAGGCCTTGCAAGGGTACCTGGCTTCTCACAGCTAGTAGCATCTGAAGGCATACAAAACATTGCAACACTTTTCTTTGGTGGCCCTGATGACCGTGAGGCTATTGCATGGAGCCTACGCATTTCAGGAAGTCCACGAGTGAACTTAACGATCATAAGATTTCTTCTGACATCTTCATCACAGAGCGAACAGATAGAGAGTGGACAATCAGAGGAAAAGGAAATTTTGATGTCACTGTCTGGGGAGGAGACGGTGAATGAGATTGACAACACCTTCATGGTGGACTTCTACAACAGGTATGTGACTTCAGGCCATATAGGGTATGTGGAGAAGTTTGTGAAGCATGGAGCAGAAACGGTGGCTGCTTTGAAACAGATAGGGGACATGTATTCTTTGTTTATAGTAGGAAAAGGTGGTAGAGGACAGAGTTCACTAACAATTGGTATGAGTGATTGGGAAGAGTGTCCAGAACTGGGAACTGTTGGTGATGTCTTGGCCTCTTCAGACTTTGATATTCATGGCTCAGTTTTGATTGTTCAGCAACATAGAGATGTCAAGAAAGGACTATTGCATGATTAG 2340 0.4333 MDATHSMFCNNDLVNPLSSMGMQVSCILVVSHIFNVVFRTVGQPGPIAQILAGLALGPMSHIPYIKATFFPASSINYYEVVSFFCRIHFMFLFGLEMNMHYAMRNLRRVNFVACGGALMGAVFGLSVSFYLHQELNTLDNAPLYYFSMIIMLVVSYTSSPMVIRLAAELRFAASDVGRTAVSSALITEMGCLLLFNVMVNWRKANHISSGLGCFVITVFVVYVNRHLAVWLNARNRNQKYLKAPELLLILFILLTSSMIIEICGYNSIMSCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFKSLQRVANMAILILLSIGSKLGGTLIASRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVIVKAYNVLLVSIVLNTIISGMIVAFLVRGEDKMFANNYTAIEPQQMEDELRILACVYDPRQVSAILATVLAVHGSRVSPSTTYLMHLIELVKKIKSNLLYHEKENADLSDDEDYGGNDVVEINNSLDSFTAETKILVHQRRAVSSFPSLYEDVCNEAEDLQVSIVLLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIVERGLARVPGFSQLVASEGIQNIATLFFGGPDDREAIAWSLRISGSPRVNLTIIRFLLTSSSQSEQIESGQSEEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGHIGYVEKFVKHGAETVAALKQIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDVKKGLLHD 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00025 779 PANTHER CATION/H + ANTIPORTER 10 770 - -
Viun11g00025 779 FunFam Cation/H(+) antiporter 1 19 417 - -
Viun11g00025 779 Pfam Sodium/hydrogen exchanger family 27 409 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun11g00025 779 Gene3D - 19 416 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00025 Viun-Chr11 200058 202747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00025 11 779 Antiporter Super Family AT1G79400 38.333 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00025 K26731 - gmx:100804522 1397.49