Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00021 ATGGAGGATTCGGTTAAAGATGCAACCAAGTCTAGTTCTGTTCTTCAGCAACAACAGAAGATAATTGTGTCGTGGGATGAAATGATAGAGAAGGGTTTGGGGAACTTCGGGTGGACACAGTTCCTTCAATGCATCCTCGTATCAGTGGCAATGTTCTTCGATTCACAGCAACTATTCATAGCAATCTACACTGATGATTACCCGACATGGCACTGCACCAACCACACCACAACATGTACCTCAAATTCCGGCATCTGCAAGCTCCCAAAGACATCATGGGCATGGGATGGACCCTCTTCCAAGACAATCATTTCACAGTTTGGCCTTGAATGCGCCACCAGCTTCATCACAGGTTTACCTCAATCCTCCTTCTTCCTAGGTTGTCTTCTTGGTTCCTTTCTTCTTGCCACCTTAGCCGACACATCTCTCGGAAGAAAGAACATGATCATTCTGTCTTGTTTATCAATGTCCGTAATTTCACTCATCATCATCTTCTCCACCAACGTCTGGATCTACTCGGCGCTGAAATTCCTCATCGGGTTCTGTCGATCATCGATCTCAACATGTTGCTTGGTGTTGCTCATGGAGAAAGTGAGCACCGAGTGGAGGTTCACGGTGGGGATTATAGAGTTTGTGTTCTTCACATCAGGGTACATGTCCTTGCCCGGTGTAGCGTACGCCAACAGAAATTCTCCATGGAAATATCTTTACGTTTGGATTTCTCTTCCTGCCCTCTCTTACTCTCTCATCGCATACCTTTTCGTCACCGAGTCTCCAAGGTGGCTTCTCATGCAAGGTCGAGTCAAAGAAGCCATGGAAATGCTCAAAGGAGTTCATGACAACGCTGCACCAGAAGAAAATGGTGTTTCAACAACAGATACGTATAATTATCTCAAAAGGGTTGATGTTTCCACATTAAATACTGAATCTTGTGAAGAAAAAAGTGATCTTGAAAGGAGTGAAGAGAAAAAGAAAAAAAGGGTTTCGTTTTCCAAACCATACTCATCAGTAGCAGTGTTGTTGAGAACAAGTTGGGGTCCGAAACGGATGGTGGGAGTTATGGGGCTAGGTCTTGGCATTGGAATGGTGTATTTTGGGATGCCATTAGCAGTGGGAAACTTGAACTACAACATTTACCTTGCAGTGGTGTTGAATGCTTTGATGGAAATACCCTCTTGCGTGGTGACCTATTTCTTGGGAAAGTGTGGGAGAAAGTTATCGATTTTTGTGTTCTCAGTGGGAAGTGGGATATGTTGCATAGTGTGTGTGGTGATACGCAGTGAAGGTGTTAAGGTGTGGGTTGCAGTGGCATCGTTTTTCTGTGCATGCACTGCATTTAACGTGTTTCTGATATACATGGTGGAGCTGTTTCCGACATGCGTGAGGAACACTACAGCATCACTTGCGAGACAAGCTGTGGTGTTTGGCTGCGTGTTCAGTCCGTTTCTGATAGCTGCAGGGAGAAAGAACAACCTTTTCTCTTATGGTGTTTTTGGAGTGCTTATAATTTCCTCCACTTTAACGTTGTTGAGTTTGCCTGAGACCAGAGGAATGCCTCTTTCTGACACCATGGATCAGCAAGAGATGAAAGAAGGAAACTTCCCTCTGTCATGTTAA 1617 0.4465 MEDSVKDATKSSSVLQQQQKIIVSWDEMIEKGLGNFGWTQFLQCILVSVAMFFDSQQLFIAIYTDDYPTWHCTNHTTTCTSNSGICKLPKTSWAWDGPSSKTIISQFGLECATSFITGLPQSSFFLGCLLGSFLLATLADTSLGRKNMIILSCLSMSVISLIIIFSTNVWIYSALKFLIGFCRSSISTCCLVLLMEKVSTEWRFTVGIIEFVFFTSGYMSLPGVAYANRNSPWKYLYVWISLPALSYSLIAYLFVTESPRWLLMQGRVKEAMEMLKGVHDNAAPEENGVSTTDTYNYLKRVDVSTLNTESCEEKSDLERSEEKKKKRVSFSKPYSSVAVLLRTSWGPKRMVGVMGLGLGIGMVYFGMPLAVGNLNYNIYLAVVLNALMEIPSCVVTYFLGKCGRKLSIFVFSVGSGICCIVCVVIRSEGVKVWVAVASFFCACTAFNVFLIYMVELFPTCVRNTTASLARQAVVFGCVFSPFLIAAGRKNNLFSYGVFGVLIISSTLTLLSLPETRGMPLSDTMDQQEMKEGNFPLSC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00021 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 37 525 - -
Viun11g00021 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 516 IPR020846 GO:0022857
Viun11g00021 538 Gene3D MFS general substrate transporter like domains 85 525 IPR036259 -
Viun11g00021 538 Pfam Sugar (and other) transporter 97 297 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun11g00021 538 SUPERFAMILY MFS general substrate transporter 101 522 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00021 Viun-Chr11 179733 183776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00021 24 531 Organic Solute Cotransporters AT1G79360 44.681 1.99e-158 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00021 - - vun:114169041 1009.98