Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00016 ATGTTCAAGAAGGCGGTGGAGGCCAAATCTCACCAGAGGCTCTCTGGTGCGGACAGAAAGAAGCTCCGACGAAGCATTAAGGACAAATTCCAAAGGGTTTCGGATTCCGACTTAGACGCCTTGCTTCCTCCCAAGGCAGAGATTGCAGTGGCCAAGTTTCAAAACCGCGTCCATGTGTACGCCGTGGAGGGAGGCTTTCCGGTGTTCTTCGACGTCGATGGCCGCGGCTCTGACATTTTCCCGACAGTTTATGCACTGTGGATTGTCCCTGAGCTTCTGCCTGCGTTCGTGCTCAAGGGTGGTGAGGTGTCGCGGTTTGTTATTGGAGGCGCCGACTTGATGTTCCCAGGTATAACGGTGCCGCCCGAAGGTCTTCCTTCGTTTCGGGCAGGGGAGCCTTGGGCCGTCAAAGTACCCGGAAATCCTGCTCCCATTGCAGTTGGGAGTACCACCATGAGCAGCGATGAAGCATTGAAAGCTGGATTACGTGGAAAGGCGCTGAGAATAACTCATTACTATCGTGATTTGCTTTGGGAATCTGCCGAAGGCTGTTATGTGCCTAATGCAGGTTTTTTCGAAGATGTTGTGTTTGAGGATCCTTCTTCGTTACAAGCTTCTTGTGATTCCGATTCTACTGATGTTACTGGTGAGACATCAACTGATCAGCAGAACAACCAAAAAAGTGACGGAGTGGTGGAATCTCTGGATGTGAATGAGTTACAACGTGATTCCGTGTCTGGATTGGTGCCACCGAATGATGGTGAAAATGATGCTGTGGATGGAGTAACCGAAGGCCTGTCTGATTTGAAGTTACCGGATACTGCCTCTGGTAATGACCCTAACGACCAGCAGACTCTATCAACTGCAGATATAGATTCCCTGTTAGATAAGTGCCTTCTTCAAGCTCTGCACACAACAGTGAAGGACAAAGATCTTCCATTGCCTGGAAGCACTCTATGGTCGAACCATGTATTACCATGTAGACCTTCAGGAATTACTTTAGATATCAAGAAATCTTCCTACAAAAAGTTATCAAAGTGGTTACAAGCAAAATCCACCTCTGGCTTGATATCAGTGAAAGAAGATAAACACAAAAAGGAAGTTATGCTGTCTTCAGTAAACCGAAACCATGCTGATTATTCATCCTTTAAGCCTGAAAAAAGGCGAGTCGAGAAAAGTGAGCAGCCTAGCGTTCAGTCTACTAATGAAGTTCGTACATCTAAAACACTGGAAGTGACTGAAATCTACAAGCCAAGTGTACATGTCAATGCCATATTTTCAGCTGTAGGAGCTGATCCGGGGAAACTTTTTAGTGCTTCTGAAGCTACCGATATTGTCTTCACATATGTTGAAAAAGAAAATCTTGTTAAACCAACAAATAAATCCATTGTGATTCTTGATGCGCTTTTATGTGACTCACTGTACAAGGGTGCTATTAAAAAAGGAACAACTTATCCTACAGAAATTCACAAGAAGGATTTAGGATCAACATTTGTGAGCCGTATGCAGCCTCACCATGTTGTAACCAGAGGGAATGAATCTGTAGTTCGTAAAGGTGCACTTAAAACAATTCAATTATTGACAGAACGACGGCAAGGCAACAAGAAGGTAACCAAACTCTCTGGTATGGAAAGTTTTCTTATAGATGCTGAAGCTTTGGCGTCAGAACTGCAGAAGAAGTTTGCATGCAGTACCTCTGTCGCAGAACTGCCAGGTAAAAAAGGGCATGAAGTTTTGGTTCAAGGAGGAGTTATCGATGACTTAGCTAGGCATTTGATTGAACAATACGGAGTTCCAAAGAGATACATTGAAGTGCTTGATAAAACCAAAAAATGA 1836 0.4455 MFKKAVEAKSHQRLSGADRKKLRRSIKDKFQRVSDSDLDALLPPKAEIAVAKFQNRVHVYAVEGGFPVFFDVDGRGSDIFPTVYALWIVPELLPAFVLKGGEVSRFVIGGADLMFPGITVPPEGLPSFRAGEPWAVKVPGNPAPIAVGSTTMSSDEALKAGLRGKALRITHYYRDLLWESAEGCYVPNAGFFEDVVFEDPSSLQASCDSDSTDVTGETSTDQQNNQKSDGVVESLDVNELQRDSVSGLVPPNDGENDAVDGVTEGLSDLKLPDTASGNDPNDQQTLSTADIDSLLDKCLLQALHTTVKDKDLPLPGSTLWSNHVLPCRPSGITLDIKKSSYKKLSKWLQAKSTSGLISVKEDKHKKEVMLSSVNRNHADYSSFKPEKRRVEKSEQPSVQSTNEVRTSKTLEVTEIYKPSVHVNAIFSAVGADPGKLFSASEATDIVFTYVEKENLVKPTNKSIVILDALLCDSLYKGAIKKGTTYPTEIHKKDLGSTFVSRMQPHHVVTRGNESVVRKGALKTIQLLTERRQGNKKVTKLSGMESFLIDAEALASELQKKFACSTSVAELPGKKGHEVLVQGGVIDDLARHLIEQYGVPKRYIEVLDKTKK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00016 611 MobiDBLite consensus disorder prediction 1 20 - -
Viun11g00016 611 Gene3D - 1 184 - -
Viun11g00016 611 Pfam Pre-PUA-like domain 2 90 IPR041366 -
Viun11g00016 611 SUPERFAMILY PUA domain-like 103 179 IPR015947 -
Viun11g00016 611 MobiDBLite consensus disorder prediction 202 231 - -
Viun11g00016 611 ProSiteProfiles Translation initiation factor SUI1 family profile. 524 596 IPR001950 GO:0003743|GO:0006413
Viun11g00016 611 SUPERFAMILY eIF1-like 489 607 IPR036877 GO:0003743|GO:0006413
Viun11g00016 611 ProSiteProfiles PUA domain profile. 93 174 - -
Viun11g00016 611 FunFam eukaryotic translation initiation factor 2D 521 605 - -
Viun11g00016 611 CDD eIF2D_C 524 606 IPR039759 -
Viun11g00016 611 CDD PUA_eIF2d-like 92 174 - -
Viun11g00016 611 SUPERFAMILY SWIB/MDM2 domain 407 507 IPR036885 -
Viun11g00016 611 Gene3D - 520 606 - -
Viun11g00016 611 FunFam Eukaryotic translation initiation factor 2D isoform A 1 184 - -
Viun11g00016 611 MobiDBLite consensus disorder prediction 243 262 - -
Viun11g00016 611 CDD eIF2D_N 9 81 - -
Viun11g00016 611 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2D 1 611 IPR039757 GO:0001731|GO:0003743
Viun11g00016 611 MobiDBLite consensus disorder prediction 381 404 - -
Viun11g00016 611 Pfam Translation initiation factor SUI1 522 599 IPR001950 GO:0003743|GO:0006413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00016 K15027 - gmx:100776835 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g00016 11 161836 166845 Viun11g00016 11 161836 166845 ECH