Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00009 ATGTCGCTCAATATGAAAACCCTAACCCAAGCATTGGCCAAAACCGCCGCGGTCATAGAGAAGACAGTGCAGACCACGGTGCAGGAGGTGACGGGCCCCAAGGCACTTCAGGACTACGAGCTCCTTGACCAGATCGGCTCTGCGGGGCCCGGGCTCGTCTGGAGGCTCTACTCGGCCCGGGCCCGTGATCCCGCGCGCCAGCACCAGTACCCTGTCGTCTGTGTCTGGGTGTTGGACAAGCGCTCTCTTTCTGAGACCCGAATGCGCGCGGGCCTTACCAAGGCCGCCGAGGATTCCTTTCTGGATTTGATTCGGACCGATGCCGCCAAGCTCGTTCGCCTCAGGCATCCTGGGGTCGTTCACGTCGTCCAGGCCCTCGACGAGAACAAGAACGCTATGGCTATGGTCACCGAACCCTTGTTTGCTTCCGCTGCCAATACTCTTGCCATTGTTGACAACATTCCTGTTCTTCCTAAAGATCTCCGGGGAATGGAAATGGGTCTGTTGGAGGTGAAGCATGGTTTACTTCAGATTGCAGAATCCCTGGACTTTCTGCACAACCAAGCCCATCTTATTCATCGAGCTATAGCACCCGAGAACATTCTTATCACCTTGAGTGGAGCCTGGAAACTTGCTGGATTTGGTTTTGCAGTTTCTGCTACTCAGACTCCTGGTGACTCATCTAATCTGCAACCCTTCCATTATGCTGAATATGATGTCGAGGACTCTATTTTGCCTCTTCAGCCATCACTTAATTATGCTGCTCCTGAGCTGGTGAGGAGCACCGGGTCTTCAGCTGTGTGTTCATCTGATATTTTCAGTTTGGGATGCCTTGCCTACCATTTAATCACCCGCAAGTCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCATTCTCATCAATCCCATCAGACCTTGTTCATGACCTGCAAAGGATGCTTTCTCTGAATGAGTCATCCAGGCCAACAGCAATGGATTTTACAGGATCACCATTTTTTCGGCATGACACCAGGTTGCGTGCCCTACGGTTCCTTGACCACATGCTTGAAAGAGATAACATGCAGAAGACAGAATTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGCGTCTTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAGCTTAGGAATGTGGTGATACAGCCAATGATTCTACCAATGGTTCTTACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATATACACTTCCAGCTCTTGTCCCCGCTTTGAGTACTGCTTCTGGTGACACACTGTTACTGCTTGTGAAGCATGCTGATCTTATAATAAACAAGACTAGTCAAGAGCATTTAGTTTCTCATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCTCGTTTGCAAGAAGAGGTCCTGAAAAAGTCTATATCCCTTTCCAAACAACTAGATTCCCAGCTTGTCAAACAAGTGGTTTTGCCCCGCGTTCATGGATTAGCACTTAAAACAACGGTTGCAGCGGTTAGAGTCAACGCGTTGTTGTGCCTTGGAGACATGGTTAACCGACTTGATAAACATTCTGTCTTGGACATCTTGCAAACAATTCAACGCTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTGGGGGTTGCAAATTCTATTTTCAAGCAGTACGGAGTAGAATTTGTAGCTGAGCATGTTCTTCCATTGCTTATGCCCCTCCTGTCTGCTCAACAATTGAACGTCCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCACAAAATAGAAGAGAAGCGAGGAGTGGCTGTGACTGATTCTGGAATGCCAGAGGTAAAACGGCCTCCCGTGGTTAATGGTGTTCAATCCGAAGCCGTGCGGACAAGCAGCAGTTCTGTGCCTGCTTCAACAAGAAGCAGCTCCTCTTGGGATGAAGATTGGGGTCCCAAAACAAAGAAAACTGCCTCTTCTACTGATAATTCTATCGATGCAGCCAGTCCATCTCTGGCAGGCAGCCATGTGGGTCAAGTAACATCTTTACAAAAGCATTTGTCCTCAACTGCTTTATCTGCTCAGCAAACAACCAACTCATGCCCGTCAGTAGATGTAGAATGGCCACCTCGGGCATCTCCTGGTGTTACCCCACAATTTAGTGATACTGAGAAGCAGACAATAGGAGCAGGAACTTCATCCACATCTAATCTTGAAGCTGATGATCCTTTTGCTGATTGGCCTCCACGTCCTAATGGCTCAGTATCAAGTGGATCTGGAATTCCCAACAATGGTACTTCAGGGATGCCCCTGAACATTGGGTTTAATTCGATGACAAATACTTCAAGCAATATTGGTCCCCAAACTAGCATGAGTTGGTCTGTTAGTTCCCAAAGTTCTGCAGATCCCATTAGTTTGAATTCAAGGACTAGTTCCACAGTGGGTAGCCTGAATAGTGGCCTCGGGCATCAGAATTCTCTTGGGTTCCTAAAGCAAAGTCAAGCTTTTCCAGCATCGAATGTTTCATACAATAATGCTCAGTCACCGGCAACAGATCTAGGATCAATATTTTCTTCCAACAAGAATGAACAAATTGCGCCTAGACTTGCACCTCCCCCATCATCTGCAGTGGGTAGAGGACGAGGAAGAGGGAGGGGAGCTGCGTCAACCACTAGGTCCTCTCACACCAAGTCACACGCTGAGCAGCCACCCCTTTTGGATTTGTTAGGGTAA 2784 0.4767 MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKALQDYELLDQIGSAGPGLVWRLYSARARDPARQHQYPVVCVWVLDKRSLSETRMRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQALDENKNAMAMVTEPLFASAANTLAIVDNIPVLPKDLRGMEMGLLEVKHGLLQIAESLDFLHNQAHLIHRAIAPENILITLSGAWKLAGFGFAVSATQTPGDSSNLQPFHYAEYDVEDSILPLQPSLNYAAPELVRSTGSSAVCSSDIFSLGCLAYHLITRKSLFDCHNNVKMYMNTLTYLSSDAFSSIPSDLVHDLQRMLSLNESSRPTAMDFTGSPFFRHDTRLRALRFLDHMLERDNMQKTEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQYTLPALVPALSTASGDTLLLLVKHADLIINKTSQEHLVSHVLPMIVRAYDDNDARLQEEVLKKSISLSKQLDSQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHSVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLSAQQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTDSGMPEVKRPPVVNGVQSEAVRTSSSSVPASTRSSSSWDEDWGPKTKKTASSTDNSIDAASPSLAGSHVGQVTSLQKHLSSTALSAQQTTNSCPSVDVEWPPRASPGVTPQFSDTEKQTIGAGTSSTSNLEADDPFADWPPRPNGSVSSGSGIPNNGTSGMPLNIGFNSMTNTSSNIGPQTSMSWSVSSQSSADPISLNSRTSSTVGSLNSGLGHQNSLGFLKQSQAFPASNVSYNNAQSPATDLGSIFSSNKNEQIAPRLAPPPSSAVGRGRGRGRGAASTTRSSHTKSHAEQPPLLDLLG 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00009 927 Pfam Protein kinase domain 104 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00009 927 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00009 927 SUPERFAMILY ARM repeat 351 607 IPR016024 -
Viun11g00009 927 MobiDBLite consensus disorder prediction 673 694 - -
Viun11g00009 927 MobiDBLite consensus disorder prediction 881 927 - -
Viun11g00009 927 MobiDBLite consensus disorder prediction 711 834 - -
Viun11g00009 927 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00009 927 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Viun11g00009 927 MobiDBLite consensus disorder prediction 769 834 - -
Viun11g00009 927 CDD PK_SCY1_like 45 346 - -
Viun11g00009 927 SUPERFAMILY Protein kinase-like (PK-like) 34 347 IPR011009 -
Viun11g00009 927 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 37 918 - -
Viun11g00009 927 Gene3D - 349 621 IPR011989 -
Viun11g00009 927 MobiDBLite consensus disorder prediction 733 757 - -
Viun11g00009 927 Gene3D Transferase(Phosphotransferase) domain 1 161 348 - -
Viun11g00009 927 MobiDBLite consensus disorder prediction 642 664 - -
Viun11g00009 927 MobiDBLite consensus disorder prediction 627 694 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00009 92 345 AGC Kinase Gene Family AT3G10540 25.287 6.84e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Viun11g00009 Pkinase 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00009 K17541 - gmx:100796211 1583.16