Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00008 ATGAGCATGGGGATGAGAATGATGGTGGTGGGCGTGGTTGTTGTGATGTTCCTTGTGCAGATGGTGGCATCATCGGATCTCCGACCTGGGTTTTACTCAGAAACATGTCCAAACGCAGAAGTGATAGTCCGAGATGTGATGAAAAGGGCCCTTGCGGTGGAACCCAGAAGTGTTGCCTCTGTTATGCGCTTCCAGTTCCATGACTGTTTTGTGAATGGGTGTGACGCCTCCATGTTGCTTGATGATACACCCACCATGGTTGGGGAGAAACTTGCTCTCTCCAACATAAACTCCCTCAGGTCATTTGAAGTTGTCGATCAAGTTAAGGAAGCCCTAGAGAACGCATGCCCTGCTGTTGTCTCCTGTGCTGACATCATTATCATGGCATCCAGAGATGCTGTCGCTCTGACAGGTGGACCCGATTGGGAGGTGAGGTTGGGAAGATTGGACAGCCTGAGTGCGAGTCAAGAAGACTCAAACGAAATCATGCCGAGCCCAAGAGCCAACGCCTCTGCTCTTATAGATCTGTTCCAGAAGTACAACCTGAGTGTGAAAGACCTTGTTGCATTATCAGGGTCTCACTCCGTTGGGCAAGGTCGGTGCTTCTCCATCATGTTTAGGCTATACAATCAATCTGGAAGTGGAAGGCCAGATCCTGCCATTGACTATGGGTACAGGGAAGAGCTTGAGAGGCTGTGTCCTCTGGATGTTGATCAGAATGTGACAGGGAACCTTGACTCCACGCCTCTTGTGTTTGATAACCAGTATTTCAAGGACTTGGTTTCTGGGAGGGGGTTTCTCAACTCTGATCAAACACTTTTCACATTCCCACAGACAAGGGAGTTTGTGAGATTCTTCAGCAGAAATCAAGATCAATTTTTCAAAGCCTTTGTGGAAGGAATGCTTAAAATGGGCGACTTGCAGTCTGGTCGGCCTGGGGAAGTTCGGACCAATTGCAGAGTGGTCAATCCTCGCCCTGCTCATTTGCTCTTTGAGTCCCAACACAACCTCCTCAGTAATAACAAATCAATTTACGATATATAA 1044 0.4818 MSMGMRMMVVGVVVVMFLVQMVASSDLRPGFYSETCPNAEVIVRDVMKRALAVEPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMVGEKLALSNINSLRSFEVVDQVKEALENACPAVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLSASQEDSNEIMPSPRANASALIDLFQKYNLSVKDLVALSGSHSVGQGRCFSIMFRLYNQSGSGRPDPAIDYGYREELERLCPLDVDQNVTGNLDSTPLVFDNQYFKDLVSGRGFLNSDQTLFTFPQTREFVRFFSRNQDQFFKAFVEGMLKMGDLQSGRPGEVRTNCRVVNPRPAHLLFESQHNLLSNNKSIYDI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00008 347 Gene3D Peroxidase, domain 2 164 304 - -
Viun11g00008 347 PANTHER PEROXIDASE 72-RELATED 19 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 Gene3D - 30 323 - -
Viun11g00008 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Viun11g00008 347 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 FunFam Peroxidase 164 304 - -
Viun11g00008 347 Pfam Peroxidase 43 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 CDD secretory_peroxidase 27 322 IPR033905 GO:0004601|GO:0042744
Viun11g00008 347 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g00008 347 FunFam Peroxidase 30 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00008 Viun-Chr11 80273 82254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00008 12 333 Peroxidase AT2G22420 73.913 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00008 K00430 - gmx:100796737 564.303