Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02885 ATGAAACTGCAAGCACATATTCCGGGGGAGATGTCAGGACAGGTACCTAATCAACCCGGGTCTCAGTTGTCTGGACTGACCCAGCTGAATGGGAATGCACTCGCTCATCAGATGCCACCTTTAGGGGGTGTTCCCCGGTCAACAATTAATATGGATCCTGAATTTCCTAGAGCTCGCACTTTTATTCAAGAGAAGATATTTGATATGTTATTGCAACGACAACAGCAGCCAGTTACAGATGTCCAGAGAAAGAAGCTTAAGGATCTTGCAAAGCGCTTGGAGGAGGGCATGTTAAAAGCTGCCCGATCTAAGGAGGATTACATGAACTTGGATACTTTGGAGAGTCGATTATCAAATTTCCTTCGACGAGCATCTATGAATAATCAAAACCAACACTATCCGCAGCTTGTTAACTCTTCTCCGATCAGTACAATGATACCAACCCCTGGTATGTCACATGCTCCAAATTCAAGCATGATGGTTGCATCTTCTGTGGATGCCTCGATGATTTATGCCAGCGGGTGTAATAGCATAGCATCAACATCTTTCAATAGTGTAAACATGTTACCAGCTGGTGGCATGCTTGGCAGTACCTTAAATAGATTTGATGGTTTGTCTAATGGTTATCAGCAGTCTTCTACCAGCTTTTCTGTTGCCTCAGGGGGGAACATTTCATCAATGGGGGTGCAGAGAATTGCTAGCCAGATGATTCCCACTCCTGGATTCTCAGTCAGCAGCAGTCACTCACACATGAACATAGATTCTAATACAAATGGAGGTGCATTTTCCAGTGTAGAGTCTACTATGGTACCACTATCACAACTTCAGCAGCAGAAGCAGATTGTTGGTGGCCAAAATAGTCATGTATTGCAGAATCTCAACAGTCAAATGGGTATTGGAATGAGATCTGGTTTATTACAGAAGCCATTTACAAACTCAAATGGTGCTATAAATAGTGGCTCAGGCTTGATTGGAAACAATATACAGGTTGCAAACGAACCTGGCACTTCTTCTGACAGCTATGCCTCCACTTATGCCAATTCCCCAAAACAGTTGCACCAGCACTTTGATCAAAGTCAGAAACCGGTGGTGCAAGGTGATGGATATGGATTAAACAATGTTGACAATTTTCCTTCTGGAAACTGTTATACGTCTGCGACATCCTCTGGGCCCATGGTGAACAATCAGAACACTAGTTCTGTTAAATTATCATCTGTGCCCAAAACTAGCACATTGTTAAGTGGTCACTCGAATTTGCATGGTATGCAGCAGGCTGCTCATATAAAGTCTCAACAAGTTAACCAGTTAGAAAAGTTGAATTTTCAGACTTCATTGACTTCAAGAGAGGGTTTTCTGCATTCTCAACAGCAATATCAGCAAAGGTCTCAACAATTGCAACAGCCAGATCAGTATGCGCTGCAGCAATTTCAATCTATGCAAAATCAGCATGTGGTCAACAGTGACACATTCAGTCAGTCTCAGCTTTCTCCCAATCTAGAAAACCGAGTGAAGCCTGAGCCTGGAATTGAACACCGCAAAGAAGTGCTCAACTCTCGTGTCTCTGAACAGTTTCATATATCTGAGATGCAGAGTCCGTTTCAGCAGAACTCATCTGAAGATTGCTCTAGGGGTGCTCAACATCTTCCATTTCCATCTGGTCACCATGATTTATCATCATCAACACCTCAAAATTCACAACAAATGTTGCACCAACATCAATTGGCTGCAGAGTCTCAAAATAATTTTAGCGTCGGGGTGCAATCCAAATCTGTGATTCTAAACCAATGGCCTCAATCACAAGATCCTGACAGTATTTCACATGATCAACATCTTCACGTGGATTTTCATCAGAGAATATCTGGACAAGATGAAGCTCAATGCAATAACTTATCATCCGATGGATCTATTATTGTTAGAAATGTTCTTTCTAGAGGCTTGGCTGAGCAGCTGGAATCTGGAATTGCTACAAATAAGGCGCACAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCTAAGCGATGTTCTGCCCCTGAAGGACGATGCAAAGAGAGGTTTTGTTCTATTGCACAGATGCTATGCAAGCACATAGATGGATGCAAGCTGCGCCATTGTCCATATCCTCGTTGCCATCATACAAAGGAGTTACTTATTCATTACGTAAATTGCAAGGATCTAGGTTGTCCTGTTTGTGTTTTTGTGAGAAAGTGTCGACGTGCTTTTCAATTGAAGCCTCAGATTCGGCCGGAACCTGAATCAAGCTTGCCAACTGCAGTGACTGGATCCAGTAAGCCTTACAGCGTTGCAGGCACATCACCAAGATTGATCTCAAAGCCTCCATTAGTTGTTGAAACTTCCGAGGACCTCCATCCATCTATAAAACGTATAAAGATTGAGCATTGCGCCCAGGCCATTTATCCTGAAAATGACCATTCTGCTTCATCTTTTATTGGAAATTGCGAATCTCTTGTTTCCAGGGATGCTCAGTCTCAACCACAACCCTATCCCAATGCTGAGAAGTCTATCTCAATTAAACCCGAATTTACAGAAGTTAAGGCCGAAGCTCCTGCAAATGTGATACATGAAAAGCTTAGTGAGATGCAAATGGATAACAATAATGCTGATGATAAAACGCCTAGTGCTGAACTTGTTAAATGTGAAGAACCTGCTAGTTTAGCTAGGCCTGAAAATATAAAAGCTGAGAAAGAAACTGGACAAGACCTGCAAGAAAATGTTGTGCAGACATCTGACATTCCAACTGGAACCAAATCTGGTAAGCCAAAAATAAAGGGAGTCTCATTAACTGAGTTATTTACTCCGGAGCAAGTGAGGGAACATATCACTGGCCTCAGGCAATGGGTTGGTCAGAGCAAGTCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAATTCGTGTCAATTGTGTGCTGTAGAGAAGCTTACCTTTGAGCCACCACCTATTTATTGCACAACTTGTGGGGTTCGCATCAAACGAAATAATATGTATTACACCACAGGCACTGGTGACACACGACATTATTTTTGCATTCCATGCTATAATGATGCTCGTACAGAGAACATAATTGTTGATGGGACTCCTATTGCCAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCATGGCAACATCAAATTTGTGCCTTATTTAATGGTAGAAGAAATGATGGTGGACAAGCTGAATATACTTGCCCTAATTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAGCCCTTACCCCAAAATGCTGTTCTTGGTGCCAAGGATTTACCAAGAACTATTCTTAGTGATCACATAGAACAACGATTATTTAGACGGCTAAAGCAAGAAAGACAGGAAAGGGCAAGACTTCAAGGAAAAAGTTATGATGAGATTCCGGGAGCTGATGCCCTTGTTATCAGAGTTGTGTCATCTGTCGACAAAAAGTTAGAAGTGAAACCACGGTTTCTGGAGATTTTTCAGGAAGAGAATTACCCAACAGAATTTCCATATAAATCAAAGGTAGTTTTGTTGTTTCAGAAGATAGAAGGTGTGGAAGTTTGCCTATTTGGCATGTACGTTCAAGAATTTGGATCTGAATGTCAATTTCCAAATCAGCGCCGAGTGTATCTTTCGTATTTGGATTCTGTGAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACAGGAGAGGCTCTTCGTACTTTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGCTACATATGGGCTTGTCCTCCATTGAAGGGTGAAGATTATATTTTGTATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTACGTGAATGGTATCTATCCATGTTAAGAAAAGCTTCGAAGGAGAATATTGTGGTCGATCTCACCAACTTATACGATCATTTCTTCATATCAACTGGTGAATGTAGGGCCAAGGTCACTGCTGCAAGACTACCATATTTTGATGGTGACTACTGGCCTGGGGCTGCGGAGGATTTAATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAAAAGGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCAGATCTTTCAGGAAATGCTTCGAAGGACCTGCTCCTCATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGTACTGGCTGTTGTATCTTAATGGTTTCTGGTAACCGTTGGGTGTGCAACCAGTGCAAGAATTATCAGATTTGTGATAAGTGTTATGAAGTAGAACAAAAGCGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAGAAACATACTCTTTATCCAGTTGAAATTGCTGATGTTCCATCTGATACAAAGGACAAAGATGATATTCTTGAGAGTGAATTCTTTGACACTAGACAGGCATTTCTCAGTCTCTGCCAGGGAAACCATTACCAGTATGATACACTAAGGCGGGCCAAACATTCATCAATGATGGTCCTCTATCATCTTCACAATCCAACTGCTCCAGCATTTGTGACAACTTGTAATATATGTTATCTTGACATTGAAACTGGTCAAGGATGGCGCTGTGAGGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCAAAAGGATGGAGGTATTGATCATCCTCATAAGTTGACAAATCATCCATCCATGGTGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCACCGAGTGTTGCAGCTACGGAAAATGCTTGATCTTCTTGTTCATGCATCCCAATGTCGTTCTGCACATTGTCAGTATCCTAATTGTCGCAAGGTGAAGGGGCTTTTCCGCCATGGGATGCACTGCAAAACACGGGCTTCTGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCATGCAAAGAATCTGAATGCCATGTACCACGTTGCAGAGATTTGAAAGAACATTTAAGGAGGTTGCAGCAACAGTCTGATTCACGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAAAGAGCTGCAGAAGTTGCTAACAATGCTGGTTGA 5178 0.4173 MKLQAHIPGEMSGQVPNQPGSQLSGLTQLNGNALAHQMPPLGGVPRSTINMDPEFPRARTFIQEKIFDMLLQRQQQPVTDVQRKKLKDLAKRLEEGMLKAARSKEDYMNLDTLESRLSNFLRRASMNNQNQHYPQLVNSSPISTMIPTPGMSHAPNSSMMVASSVDASMIYASGCNSIASTSFNSVNMLPAGGMLGSTLNRFDGLSNGYQQSSTSFSVASGGNISSMGVQRIASQMIPTPGFSVSSSHSHMNIDSNTNGGAFSSVESTMVPLSQLQQQKQIVGGQNSHVLQNLNSQMGIGMRSGLLQKPFTNSNGAINSGSGLIGNNIQVANEPGTSSDSYASTYANSPKQLHQHFDQSQKPVVQGDGYGLNNVDNFPSGNCYTSATSSGPMVNNQNTSSVKLSSVPKTSTLLSGHSNLHGMQQAAHIKSQQVNQLEKLNFQTSLTSREGFLHSQQQYQQRSQQLQQPDQYALQQFQSMQNQHVVNSDTFSQSQLSPNLENRVKPEPGIEHRKEVLNSRVSEQFHISEMQSPFQQNSSEDCSRGAQHLPFPSGHHDLSSSTPQNSQQMLHQHQLAAESQNNFSVGVQSKSVILNQWPQSQDPDSISHDQHLHVDFHQRISGQDEAQCNNLSSDGSIIVRNVLSRGLAEQLESGIATNKAHRNQQRWLLFLLHAKRCSAPEGRCKERFCSIAQMLCKHIDGCKLRHCPYPRCHHTKELLIHYVNCKDLGCPVCVFVRKCRRAFQLKPQIRPEPESSLPTAVTGSSKPYSVAGTSPRLISKPPLVVETSEDLHPSIKRIKIEHCAQAIYPENDHSASSFIGNCESLVSRDAQSQPQPYPNAEKSISIKPEFTEVKAEAPANVIHEKLSEMQMDNNNADDKTPSAELVKCEEPASLARPENIKAEKETGQDLQENVVQTSDIPTGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGTGDTRHYFCIPCYNDARTENIIVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQNAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARLQGKSYDEIPGADALVIRVVSSVDKKLEVKPRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVDLTNLYDHFFISTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACTGCCILMVSGNRWVCNQCKNYQICDKCYEVEQKREERERHPINQREKHTLYPVEIADVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNHPSMVDRDAQNKEARQHRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02885 1725 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1109 1545 IPR031162 GO:0004402
Viun10g02885 1725 ProSiteProfiles Zinc finger TAZ-type profile. 655 735 IPR000197 -
Viun10g02885 1725 SUPERFAMILY RING/U-box 1407 1480 - -
Viun10g02885 1725 ProSitePatterns Zinc finger ZZ-type signature. 1552 1579 IPR000433 GO:0008270
Viun10g02885 1725 SUPERFAMILY FYVE/PHD zinc finger 1053 1093 IPR011011 -
Viun10g02885 1725 SMART KAT11_2 1142 1439 IPR013178 GO:0004402|GO:0006355|GO:0016573
Viun10g02885 1725 MobiDBLite consensus disorder prediction 485 500 - -
Viun10g02885 1725 ProSiteProfiles Zinc finger TAZ-type profile. 1607 1690 IPR000197 -
Viun10g02885 1725 FunFam Histone acetyltransferase HAC1-like protein 1604 1721 - -
Viun10g02885 1725 ProSitePatterns Zinc finger PHD-type signature. 1020 1091 IPR019786 -
Viun10g02885 1725 ProSiteProfiles Zinc finger ZZ-type profile. 1547 1600 IPR000433 GO:0008270
Viun10g02885 1725 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1044 1092 IPR013083 -
Viun10g02885 1725 SMART TAZ_2 1610 1688 IPR000197 -
Viun10g02885 1725 SMART TAZ_2 657 735 IPR000197 -
Viun10g02885 1725 ProSiteProfiles Zinc finger ZZ-type profile. 1427 1490 IPR000433 GO:0008270
Viun10g02885 1725 MobiDBLite consensus disorder prediction 529 543 - -
Viun10g02885 1725 FunFam Histone acetyltransferase HAC1 1546 1597 - -
Viun10g02885 1725 PANTHER CBP/P300-RELATED 84 1716 IPR013178 GO:0004402|GO:0006355|GO:0016573
Viun10g02885 1725 SUPERFAMILY RING/U-box 1528 1596 - -
Viun10g02885 1725 SMART zz_5 1546 1592 IPR000433 GO:0008270
Viun10g02885 1725 SMART zz_5 1426 1470 IPR000433 GO:0008270
Viun10g02885 1725 Pfam Histone acetylation protein 1149 1370 IPR013178 GO:0004402|GO:0006355|GO:0016573
Viun10g02885 1725 Gene3D TAZ domain 651 740 IPR035898 -
Viun10g02885 1725 Pfam TAZ zinc finger 1617 1687 IPR000197 -
Viun10g02885 1725 Pfam TAZ zinc finger 664 732 IPR000197 -
Viun10g02885 1725 Pfam PHD-finger 1050 1092 IPR019787 -
Viun10g02885 1725 SUPERFAMILY TAZ domain 1609 1692 IPR035898 -
Viun10g02885 1725 Gene3D TAZ domain 1604 1721 IPR035898 -
Viun10g02885 1725 MobiDBLite consensus disorder prediction 529 574 - -
Viun10g02885 1725 Coils Coil 1125 1145 - -
Viun10g02885 1725 Gene3D - 1423 1482 IPR043145 -
Viun10g02885 1725 FunFam Histone acetyltransferase of the CBP family 12 1423 1482 - -
Viun10g02885 1725 MobiDBLite consensus disorder prediction 485 504 - -
Viun10g02885 1725 CDD PHD_HAC_like 1019 1091 - -
Viun10g02885 1725 Pfam Zinc finger, ZZ type 1549 1588 IPR000433 GO:0008270
Viun10g02885 1725 MobiDBLite consensus disorder prediction 553 574 - -
Viun10g02885 1725 SUPERFAMILY TAZ domain 657 738 IPR035898 -
Viun10g02885 1725 Gene3D - 1546 1600 IPR043145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02885 Viun-Chr10 41287285 41302462 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Viun10g02885 HAT_KAT11 2.6e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02885 K04498 - gmx:100809207 3171.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02885 10 41287285 41302462 Viun10g02885 10 41287285 41302462 ECH