Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02861 ATGTATACATTGTTAGGAGGCTGCCAAAGCAAACTACGCAGCACCACCACCAACTGGTCAGCTGCATCTCCCAATAAAGACAAACTTGCCAACATTACAAGCGACCTATTTGACACCTTTCATTGTTATTGTTCACGCAAAGATATACATTGTCTTGATGTTGTTCTCCAAGACATGGATGTGGTGAAAGGAATAACTGAATATGTCTATTATGCTGCAATTGAGAACTTGGTGCTTGGTGCAGCCTCCAGACATGGCTTTATTAGATTCAAGACAAGTACACCAAGCAGCATATTAAAGGGAGCCCCAGATTTCTGTAGTGTGTATGTCATTTCTAAGGGGAGAATATCTTCAGTTAGGAGTGCTGCTCGAAGGGCCCCACATGCCTCCCCATTGCTGAGCCAAATAGAGACTCTAAACGATGAGCATGAAAATGAATTTGATATACCCTGTAGACCACGGTTGAGCTTCAACGGCAACAGGGTATCACCCAAACCGATCACCTTGCAAAGTGAATCCATGAACAAGATACAACTTGGCAGAAGATCAGGGGCAATTGGAAGGTTATCCGTGGATATGGCCGAACAAGACTCTGACATATCATTTGTAAGCTCTGACAGGCCCAGCAGTGTGCGTTCATCCTCTGTTTTCTATGACCATGCCGATTGTGGCAGAAATGGCCGAACTTCAACCAGTTCAGATCGTAGCTGGGGGTCAACATGCATGAGACTCAAGTTCACCGATCCCAGTTCACCGGACCATTTATTTTCAGACGAAGGTAGCCGCTCATCAATTTCTAGTTTGCAAAACATGGACGAGGTTGAAGCTGATGTGAGGAGGTTGAGGCTGGAGTTAAAGCAGACAATGGAAATGTACAGTACTGCATGCAAAGAGGCCCTAACAGCGCAGCAGAAGTTACTGGAACTGCACAACTCGAGAATTGAGGAAGAAAAGAAACTAGAGGAGGCACGGGAATCCCAGGAAGCAGCAGAGGCGATTGCAGAGAAAGAGAAAGAAAGAAGCAAAGCAGCAAAAGAAACAGCAGAATTGGCAAAGAGACTTGCAAGGCTGGAAACAAAGAAAAGAGCAGAAATAGAAGTGAAATGTCTGAAAGAAGCAGAGGAAATGAGGAAAGTGTTAAAAAATCTAAAACAGACAGATAAAAGATACAGGAGATACACAATGGAGGAGATTGTAAAGGCAACGAACGAGTTTTCAGAATCCCAGAAAATAGGTGAAGGGGGTTATGGCCCCGTGTACAAGTGTTACCTCGATCACACAGCAGTGGCGGTGAAGGTTCTGCGCCCAGGATCAGCACAGGGAGAGACACAATTTCAGCAAGAGGTGAACATACTAGGGTCCATAAGACATCCGAACATGGTGCTTCTGGTAGGAGCGTGTCCGGAAGAGGGAGTGCTGATATACGAGTACATGGAGAATGGAAGCTTGGAAGAGTGTCTGTTCGGGAAGAAGGAGGAGATGAGGAGTTGGGAGCTGAGGTTTGGAATAGCGGCGGAGATAGCGACGGGGCTACTGTTCCTGCATCAGACAAAGCCAGAACCGCTGGTGCACCGAGACCTGAAGCCCGCGAATATATTGCTGGACCAGAACTACGTGAGCAAGATAAGCGATGTGGGACTGGCGAGGCTTCTGCCTGCTGCAGTGGCGGAGAACGAGACGCAGTGCCGCATGACTGCCGCAGCAGGAACCTTCTGCTACATCGATCCCGAGTACCAGCAGACCGGAATGCTGGGTGTTAAGTCGGATGTGTATTCTCTCGGAATCATTATTCTTCAGCTATTGACGGGAAGGCCCGCCATGGGCCTGGCCCACCAGGTCCAACAATCCATCAAGAACGAGACCTTTGCCCAGATTCTGGACCCATCCGTCCCAGCCTGGCCCCTCCCACAGGCCCTCTCCCTTGCCAACTTGGCACTCCAGTGCGCGCAACTCAGCCGGAAGGACCGCCCTGACCTTGCCACATTCCTCCTCCCTCAGCTCCAAATGCTGAGAGACTTTGCCCACCACCACCACCGCCATCAACAACCTCCCCAGGATCAGGACGTCCTCAGCGAACGCACTTCTCAACACTCCGGAAGCCCATCCAGCCCGTCAAGCCCAACCACAGACCAACCCATACAAGATGGTACCACCTAG 2157 0.4947 MYTLLGGCQSKLRSTTTNWSAASPNKDKLANITSDLFDTFHCYCSRKDIHCLDVVLQDMDVVKGITEYVYYAAIENLVLGAASRHGFIRFKTSTPSSILKGAPDFCSVYVISKGRISSVRSAARRAPHASPLLSQIETLNDEHENEFDIPCRPRLSFNGNRVSPKPITLQSESMNKIQLGRRSGAIGRLSVDMAEQDSDISFVSSDRPSSVRSSSVFYDHADCGRNGRTSTSSDRSWGSTCMRLKFTDPSSPDHLFSDEGSRSSISSLQNMDEVEADVRRLRLELKQTMEMYSTACKEALTAQQKLLELHNSRIEEEKKLEEARESQEAAEAIAEKEKERSKAAKETAELAKRLARLETKKRAEIEVKCLKEAEEMRKVLKNLKQTDKRYRRYTMEEIVKATNEFSESQKIGEGGYGPVYKCYLDHTAVAVKVLRPGSAQGETQFQQEVNILGSIRHPNMVLLVGACPEEGVLIYEYMENGSLEECLFGKKEEMRSWELRFGIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDQNYVSKISDVGLARLLPAAVAENETQCRMTAAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIILQLLTGRPAMGLAHQVQQSIKNETFAQILDPSVPAWPLPQALSLANLALQCAQLSRKDRPDLATFLLPQLQMLRDFAHHHHRHQQPPQDQDVLSERTSQHSGSPSSPSSPTTDQPIQDGTT 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02861 718 SUPERFAMILY Protein kinase-like (PK-like) 388 661 IPR011009 -
Viun10g02861 718 Gene3D Transferase(Phosphotransferase) domain 1 478 695 - -
Viun10g02861 718 ProSiteProfiles Protein kinase domain profile. 405 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02861 718 Coils Coil 297 360 - -
Viun10g02861 718 CDD STK_N 11 114 - -
Viun10g02861 718 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 377 477 - -
Viun10g02861 718 MobiDBLite consensus disorder prediction 687 718 - -
Viun10g02861 718 MobiDBLite consensus disorder prediction 675 718 - -
Viun10g02861 718 PANTHER OS02G0152300 PROTEIN 21 692 - -
Viun10g02861 718 Pfam Protein kinase domain 406 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02861 718 Coils Coil 271 291 - -
Viun10g02861 718 Gene3D Phosphorylase Kinase; domain 1 373 477 - -
Viun10g02861 718 SMART serkin_6 405 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02861 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Viun10g02861 718 MobiDBLite consensus disorder prediction 318 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02861 Viun-Chr10 41172990 41177594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02861 26 674 Receptor kinase-like Gene Family AT1G78940 55.821 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Viun10g02861 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02861 - - gmx:100818471 874.004