Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02858 ATGGCCATGTTGCTTGCTGTTGTTATTCTTTGCATATATTTGTTTCGCAGTACAACTCCTCAACAGGAATCTTCTGGCCTGGGAAGGTCAACTTCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCGGGTATTGCTGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTGAGAGTTTCTAGTGCTGCGAGACGGTCTGCAAGAGAAGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTATCTGCCATCATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACACACCTGGTTCAATGAAGGTTACTGATTTACCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCTCTATTTGCTCAGTTGGGTGGTGGAATATACACCAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGATCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGTGACAATGTGGGAGATTGTGCTGCTCGAGGTGCTGATCTCTTTGAAAGTATTGCAGCTGAAATAATCAGTGCCATGATACTTGGTGGATCAATGGCACAGCGTTGTAAAATTGCAGATCCATCGGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCCTTCGATTTGGTGGTATCGTCAGTTGGAATATTTTCTATTCGGGGAACACGTGAAACTGGAGTAATGGCTCCAATGGAGGATCCGATGACAATTCTTCAAAAAGGATATTCTTATACGATAGTCTTAGCTGTTTTGGCATTTGGTTTGTCTACCCGCTGGTTACTTTACACTGATCAAGCACCTTCAGCATGGTTCAATTTTGCCTTGTGTGGGTTGATTGGTATTATCACTGCATACATTTTTGTCTGGATTGCCAAGTATTATACTGATTACAAGCATGAGCCTGTGCGCATATTAGCGCTTTCCAGTTCCACTGGTCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTATCTCAGCTTTCTGGCTGGGTCGCACCTCTGGACTAGTAGACGAATCAGGAACCCCAACTGGTGGGTTGTTTGGCACTGCTGTGGCAACGATGGGAATGCTAAGCACTGCTGCCTATATTCTTACTATGGATATGTTTGGCCCAATAGCTGATAATGCAGGAGGAATTGTGGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATAACGGATGTCCTTGATGCAGTAGGAAACACGACCAAAGCTACCACCAAAGGCTTTGCTATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGACGAGGTTTCCGCTTTTGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCCGAAGTTTTCGTTGGTGGTTTGCTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCTGTCGGCAGAACTGCACAAGAGGTTGTTAATGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAAAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCATTGGCAATCATTTCACCTATTGTAGTCGGTTTTGTATTCCGAATTTTGGGCTACTATACAGGACAACCTTTACTCGGGGCTAAAGTGGTGGCTGCTTTGCTCATGTTTGCAACAGTGTCTGGTATTCTTATGGCTCTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGGAAGGGAAGTGAAGCTCACAAAGCAGCCGTAACCGGAGATACGGTGGGAGATCCATTCAAAGACACAGCTGGTCCTTCAATCCATGTCCTTATAAAGATGCTCGCAACGATTACGCTAGTAATGGCTCCAATCTTCCTGTGA 2040 0.4451 MAMLLAVVILCIYLFRSTTPQQESSGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGSMAQRCKIADPSGFILFPLVVHSFDLVVSSVGIFSIRGTRETGVMAPMEDPMTILQKGYSYTIVLAVLAFGLSTRWLLYTDQAPSAWFNFALCGLIGIITAYIFVWIAKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGRTSGLVDESGTPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFVFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPIFL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02858 679 NCBIfam V-type H(+)-translocating pyrophosphatase 4 678 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02858 679 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 2 678 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02858 679 Pfam Inorganic H+ pyrophosphatase 4 674 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02858 679 PIRSF H+-PPtase 1 679 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02858 679 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 679 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02858 Viun-Chr10 41161974 41170151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02858 1 679 Primary Pumps ATPases AT1G16780 89.838 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02858 K23025 - gmx:100787805 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02858 10 41161974 41170151 Viun10g02858 10 41161974 41170151 ECH