Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02857 ATGATGGAAAATGACATGGAGAGCGGTACTTTGGGTTTGGGGGCTTACCAGGACAAGCCCAGAGTTTTTCCCAACATGCGCACTAAACCTTACACCCCTCTGATATTTCGGATTCTGCTCAGTATAAATGTTCGTGTCCTGTTCGTTATTTTGCTCCTTGGGCTGGGTGCTATCTTTTACGTGGGAGCCAGTACCTCTCCAATTATTGTGTTTGTCATCTCTGTTTGCATTCTCAGCTTCCTTGTTGCCATTTATCTTACAAAGTGGGTGCTCGCAAAAGATGAGGGACCTCCTGAAATGGTTCAGATAGCAGATGCTATACGAGATGGAGCTGAAGGATTTTTCAAGACCCAGTATGGTAGTATATCCAAGATGGCCATGTTGCTTGCTGTTGTTATTCTTTGCATATATTTGTTTCGCAGTACAACTCCTCAACAGGAATCTTCTGGCCTGGGAAGGTCAACTTCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCGGGTATTGCTGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTGAGAGTTTCTAGTGCTGCGAGACGGTCTGCAAGAGAAGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTATCTGCCATCATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACACACCTGGTTCAATGAAGGTTACTGATTTACCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCTCTATTTGCTCAGTTGGGTGGTGGAATATACACCAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGATCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGTGACAATGTGGGAGATTGTGCTGCTCGAGGTGCTGATCTCTTTGAAAGTATTGCAGCTGAAATAATCAGTGCCATGATACTTGGTGGATCAATGGCACAGCGTTGTAAAATTGCAGATCCATCGGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCCTTCGATTTGGTGGTATCGTCAGTTGGAATATTTTCTATTCGGGGAACACGTGAAACTGGAGTAATGGCTCCAATGGAGGATCCGATGACAATTCTTCAAAAAGGATATTCTTATACGATAGTCTTAGCTGTTTTGGCATTTGGTTTGTCTACCCGCTGGTTACTTTACACTGATCAAGCACCTTCAGCATGGTTCAATTTTGCCTTGTGTGGGTTGATTGGTATTATCACTGCATACATTTTTGTCTGGATTGCCAAGTATTATACTGATTACAAGCATGAGCCTGTGCGCATATTAGCGCTTTCCAGTTCCACTGGTCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTATCTCAGCTTTCTGGCTGGGTCGCACCTCTGGACTAGTAGACGAATCAGGAACCCCAACTGGTGGGTTGTTTGGCACTGCTGTGGCAACGATGGGAATGCTAAGCACTGCTGCCTATATTCTTACTATGGATATGTTTGGCCCAATAGCTGATAATGCAGGAGGAATTGTGGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATAACGGATGTCCTTGATGCAGTAGGAAACACGACCAAAGCTACCACCAAAGGCTTTGCTATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGACGAGGTTTCCGCTTTTGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCCGAAGTTTTCGTTGGTGGTTTGCTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCTGTCGGCAGAACTGCACAAGAGGTTGTTAATGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAAAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCATTGGCAATCATTTCACCTATTGTAGTCGGTTTTGTATTCCGAATTTTGGGCTACTATACAGGACAACCTTTACTCGGGGCTAAAGTGGTGGCTGCTTTGCTCATGTTTGCAACAGTGTCTGGTATTCTTATGGCTCTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGGAAGGGAAGTGAAGCTCACAAAGCAGCCGTAACCGGAGATACGGTGGGAGATCCATTCAAAGACACAGCTGGTCCTTCAATCCATGTCCTTATAAAGATGCTCGCAACGATTACGCTAGTAATGGCTCCAATCTTCCTGTGA 2412 0.4457 MMENDMESGTLGLGAYQDKPRVFPNMRTKPYTPLIFRILLSINVRVLFVILLLGLGAIFYVGASTSPIIVFVISVCILSFLVAIYLTKWVLAKDEGPPEMVQIADAIRDGAEGFFKTQYGSISKMAMLLAVVILCIYLFRSTTPQQESSGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGSMAQRCKIADPSGFILFPLVVHSFDLVVSSVGIFSIRGTRETGVMAPMEDPMTILQKGYSYTIVLAVLAFGLSTRWLLYTDQAPSAWFNFALCGLIGIITAYIFVWIAKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGRTSGLVDESGTPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFVFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPIFL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02857 803 Pfam Inorganic H+ pyrophosphatase 77 798 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02857 803 PIRSF H+-PPtase 62 803 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02857 803 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 66 803 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02857 803 NCBIfam V-type H(+)-translocating pyrophosphatase 71 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun10g02857 803 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 93 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02857 Viun-Chr10 41161974 41171068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02857 1 803 Primary Pumps ATPases AT1G16780 86.675 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02857 K23025 - gmx:100787805 1461.05