Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02832 ATGAAGGAGAAGGACAAAGAGAAGGAGACGGAGAAGAAGAAGTATCCGATTGGAGCTGAACATTACCTTCTCTACGAAGAGATTGGTCAGGGCGTTAGCGCTTCTGTTCACCGCGCGCTCTGCGTTCCCCTCAATGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGCGACAATTGCGATCTGAACAACGTGTCTCGTGAGGCGCAGACAATGATCCTGGTGGACCACCCTAACGTGCTCAAATCGCACTGCTCCTTCGTGAGCGAGCACAATCTGTGGGTGGTCATGCCGTATATGTCGGGCGGCTCATGCCTCCACATACTCAAAGCCGCGCACCCCGACGGGTTTGAGGAGGTTGTGATTGCGACCATTCTCAAAGAGGTGCTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCTGGCAACATTCTCATCGATTCACGCGGCGCCGTCAAGCTTGGCGATTTTGGTGTTTCCGCTTGCCTTTTTGATTCTGGTGACCGCCAACGCACAAGGAATACATTTGTTGGAACACCTTGCTGGATGGCACCCGAGGTCATGGAGCAACTCCACGGCTATAACTTCAAAGCTGACATCTGGTCATTTGGTATTACCGCCTTGGAGCTTGCTCATGGTCATGCTCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTTTGCAAAACGCACCCCCTGGCCTTGACTACGAAAGGGATAAGAAGTTCTCGAAGTCGTTTAAGCAGATGATTGCTAGCTGCTTGGTAAAAGATCCTTCGAAACGACCCTCTGCAAGCAAGTTGTTGAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAATGATCATATTCGAAGGCTCTTGGAGGGGCTGCCTGCTTTAGGTGATCGAATGGAGGCCCTGAAGAGAAAAGAAGAAGATATGCTCGCTCAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAATGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCCATGATTTCGACGATGCTATTTCCGATATGAATCATGTAGCAAGTTCAAGTTCTTTAGCTACACTCGATTCACAAGAGAAACCATTACCGAGTGCATTTCACAACCCTTCTCGATCTGTTGATATGGAAGAAAATGATGAGATGCGAAATCAATCAGCTTCTGTTTCTGCAATTGATGCCAAAACTAGGCTTGAAAAATCTGACGATGACTCCTGCATCACCAGTTCGAGCCACGAACCATCATCCTGTGTCGATGATCACGTGGACAATAATTTGGGTGAGAAATCTGACATCGAAAACGGTGGAAGATTTGTGGACGGGATGTCCACCCATCATTATCATAGAAGAGGATGTTCATCGAGCATCTTACCAGAAGTTACCTTTCCACCAATTCGACCACCAGAAAGTGAGAAACCGCAAAATCTGCTCCCGAACGGTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTACTTACTGAACTTCCATCAAGAGTCTCAAAATCACCAGCTAATTCTGATGACACTGATGAGAAATCGAAAGTGCCAGTTGTACAGCAGAGAGGACGTTTTAAGGTTACATCTGAAAATGTTGACCCAGAAAAGGTGGGCCCTTCTCCTGTACTGCAAAAGAGTCATAGCATGCAGGTTTTTAGCCATAATGTTGCTTCTGTACAACAACCACCTTTGCCATTATTACCAGCATATGAAGCCACATCATCAAATCTTTCGGGCCACGCTGTGTTTCCTATATTGCACTCTGTACTGCAGACAAATATTCTTCAACAGGAAAGCATTTTATGTTTAATGAGGCTTATTACTGCCGGTGACTCTACAGCTGATGGCTCGTGTACCCTAGCACAAATAGCAGGAACTGAAAAATCTTTGCTTGAAGCAGCTCAGGAGAGGGAGAAGGAGTTACTTCATGAGATAACTGATTTACAATGGAGGCTTATCTGTGCTCAGGAGGAGCTTCAAAAATTGAAAACAGAACACGCCCAGGTGTGA 2085 0.4657 MKEKDKEKETEKKKYPIGAEHYLLYEEIGQGVSASVHRALCVPLNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSEHNLWVVMPYMSGGSCLHILKAAHPDGFEEVVIATILKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSNDHIRRLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLEDMKAQASLIHDFDDAISDMNHVASSSSLATLDSQEKPLPSAFHNPSRSVDMEENDEMRNQSASVSAIDAKTRLEKSDDDSCITSSSHEPSSCVDDHVDNNLGEKSDIENGGRFVDGMSTHHYHRRGCSSSILPEVTFPPIRPPESEKPQNLLPNGSSCNATSVPQTGEDVLTELPSRVSKSPANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVGPSPVLQKSHSMQVFSHNVASVQQPPLPLLPAYEATSSNLSGHAVFPILHSVLQTNILQQESILCLMRLITAGDSTADGSCTLAQIAGTEKSLLEAAQEREKELLHEITDLQWRLICAQEELQKLKTEHAQV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02832 694 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 689 IPR047173 GO:0043539
Viun10g02832 694 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02832 694 MobiDBLite consensus disorder prediction 496 516 - -
Viun10g02832 694 MobiDBLite consensus disorder prediction 484 542 - -
Viun10g02832 694 FunFam Serine/threonine-protein kinase BLUS1 11 99 - -
Viun10g02832 694 Coils Coil 656 690 - -
Viun10g02832 694 Gene3D Transferase(Phosphotransferase) domain 1 103 335 - -
Viun10g02832 694 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Viun10g02832 694 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Viun10g02832 694 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
Viun10g02832 694 FunFam serine/threonine-protein kinase BLUS1 isoform X1 103 335 - -
Viun10g02832 694 MobiDBLite consensus disorder prediction 374 388 - -
Viun10g02832 694 MobiDBLite consensus disorder prediction 374 444 - -
Viun10g02832 694 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02832 694 CDD STKc_OSR1_SPAK 20 283 - -
Viun10g02832 694 Pfam Protein kinase domain 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02832 Viun-Chr10 41051421 41057767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02832 11 676 MAP Kinase Kinase Kinase Kinase AT1G79640 64.853 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Viun10g02832 Pkinase 9.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02832 K08835 - gmx:100780339 1201.42