Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02828 ATGTTTGCCATTGTCTCGAACATTCTTCAGCATTCCCCTGTTCCTTTTATACCTCACATTCTCAACGATTCTCTGCATTGCAATTTGCGAACTCACTCAGAGAAACCATCACCAACTACACTCACAAAACCGTTTTCCATTCACTTTCCTCTTATGGCTTCCAAGGTAGAAGGGAAGGGCATTGGCATTGACCTTGGCACCACCTACAGTTGCGTGGGCGTGTGGCAAAACGACCGCGTTGAGATCATAGCCAACGACCAGGGCAACAGAACCACACCATCCTACGTGGCATTCACCGACACCGAGCGTCTCATCGGAGATGCTGCCAAGAACCAGGTTGCCATGAATCCGCAGAACACCGTGTTCGACGCCAAGCGCCTCATCGGGCGCCGGTTCTCGGACCCTTCGGTGCAGGCCGACATGAAGCACTGGCCTTTTAAGGTTGTTCCCGGTCCCGCCGAGAAGCCCATGATCGTGGTGAGCTACAAGGGCGAGGAGAAGCAGTTTGCGGCGGAGGAGATTTCATCGATGGTGTTGACGAAGATGAAGGAGATCGCGGAGGCTTACCTTGGACAGAGCGTGAAGAACGCTGTGATCACTGTCCCTGCCTACTTCAACGACTCTCAGAGGCAAGCCACGAAGGACGCCGGTGCCATTGCGGGGCTTAACGTGATGAGAATCATCAACGAGCCAACCGCTGCTGCCATTGCCTATGGATTAGACAAGAAGGGTTCGAGGAGTGGCGAAAAGAACGTGCTTATCTTCGACCTTGGTGGTGGAACCTTCGATGTGTCGCTCCTCACCATTGAGGAAGGCATTTTCGAAGTCAAAGCCACTGCCGGAGACACTCATTTGGGAGGTGAAGATTTTGACAACAGGCTTGTGAACCACTTTGTGGCTGAGTTCAAGAGGAAACACAAGAAGGATATAAGCAGCAGTGCGAGAGCTCTAAGGAGATTAAGGACTGCGTGTGAGAGAGCTAAGAGAACTCTCTCATCGACTTCCCAAACAACAATCGAGATTGACTCTCTCTACGAAGGTATTGACTTCTATTCCACCATCACCAGAGCCAGGTTTGAGGAGCTGAACATGGACTTGTTCCGCAAGTGCATGGAACCTGTTGAGAAGTGTTTGAGGGACTCCAAGATCGACAAGAGTCACGTCCACGACGTTGTCCTCGTTGGTGGATCCACCAGGATTCCAAAAGTGCAACAACTGTTGCAGGATTTCTTCAACGGGAAAGAGCTTTGCAAGAGCATTAACCCCGACGAGGCTGTGGCATACGGTGCTGCAGTGCAGGCTGCTATTCTGAGCGGCGAGGGGAACGAGAAGGTTCAGGACTTGCTTCTTCTTGATGTTACTCCTCTTAGCCTCGGCATTGAAACTGCAGGGGGCGTGATGACAGTGTTGATTCCGAGGAACACGACAATTCCCACCAAGAAGGAGCAGATTTTCTCTACTTACGCTGATAATCAGCCAGGAGTGCTGATACAGGTGTATGAAGGTGAGAGAGCGAGGACCAAAGACAACAACCTGTTGGGGAAGTTTGAACTGGCTGGAATCCCTCCAGCACCTAGAGGAGTTCCTCAAATCAATGTGTGTTTTGACATCGACGCAAATGGGATTTTGAATGTTTCGGCTGAGGACAAGACTGCAGGGGTGAAGAACAAGATCACAATCACGAATGATAAGGGAAGGCTGAGCAAGGAGGATATTGAGAGAATGGTGCAGGAGGCTGAGAGATACAAGGCAGAGGATGAGGATGTGAAGAAGAAGGTGGAGGCCAAGAACTCGTTGGAGAACTATGCTTACAACATGAGGAATACTGTGAAGGATGAGAAGTTTGCTGGAAAACTAAACCCTGATGAAAAACAGAAGATAGAGAAGGCTGTTGATGAAACTATTGAATGGCTTGACGGGAATCAACTGGCTGAGGTGGAGGAATTTGAGGACAGATTAAAGGATTTGGAGGGACTCTGCAACCCTATTATCTCAAAGATGTATCAGGGGAGTGCTGCAGATGTGCCAATGGGAGGTGCAGATGACATTCCTAATGGTGGTGGCTATGGAAAATCATCAACTGGTGGTGCTGGTGCTGGGCCTAAGATTGAAGAAGTTGACTGA 2124 0.4991 MFAIVSNILQHSPVPFIPHILNDSLHCNLRTHSEKPSPTTLTKPFSIHFPLMASKVEGKGIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQADMKHWPFKVVPGPAEKPMIVVSYKGEEKQFAAEEISSMVLTKMKEIAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKGSRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISSSARALRRLRTACERAKRTLSSTSQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSHVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQIFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELAGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEDIERMVQEAERYKAEDEDVKKKVEAKNSLENYAYNMRNTVKDEKFAGKLNPDEKQKIEKAVDETIEWLDGNQLAEVEEFEDRLKDLEGLCNPIISKMYQGSAADVPMGGADDIPNGGGYGKSSTGGAGAGPKIEEVD 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02828 707 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 442 595 IPR029047 -
Viun10g02828 707 Gene3D - 596 670 IPR029048 -
Viun10g02828 707 PANTHER HEAT SHOCK PROTEIN 70KDA 61 634 IPR013126 GO:0005524|GO:0140662
Viun10g02828 707 FunFam Heat shock protein 70 597 670 - -
Viun10g02828 707 ProSitePatterns Heat shock hsp70 proteins family signature 3. 391 405 IPR018181 -
Viun10g02828 707 Gene3D - 61 435 - -
Viun10g02828 707 FunFam Heat shock 70 kDa protein 122 177 - -
Viun10g02828 707 Coils Coil 572 596 - -
Viun10g02828 707 Pfam Hsp70 protein 61 669 IPR013126 GO:0005524|GO:0140662
Viun10g02828 707 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 443 600 IPR029047 -
Viun10g02828 707 FunFam Heat shock protein 70 61 247 - -
Viun10g02828 707 FunFam Heat shock 70 kDa protein 248 314 - -
Viun10g02828 707 Gene3D - 122 177 - -
Viun10g02828 707 Gene3D Actin; Chain A, domain 4 286 369 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 197 217 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 420 440 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 59 72 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 388 404 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 447 466 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 87 99 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 260 270 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 109 117 - -
Viun10g02828 707 PRINTS 70kDa heat shock protein signature 528 544 - -
Viun10g02828 707 SUPERFAMILY Actin-like ATPase domain 248 439 IPR043129 -
Viun10g02828 707 ProSitePatterns Heat shock hsp70 proteins family signature 2. 254 267 IPR018181 -
Viun10g02828 707 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 594 671 IPR029048 -
Viun10g02828 707 FunFam Heat shock cognate 70 kDa protein 2 370 417 - -
Viun10g02828 707 FunFam Heat shock 70 kDa 442 596 - -
Viun10g02828 707 Gene3D - 243 417 - -
Viun10g02828 707 MobiDBLite consensus disorder prediction 672 707 - -
Viun10g02828 707 CDD HSPA1-2_6-8-like_NBD 61 438 - -
Viun10g02828 707 FunFam Heat shock cognate 71 kDa protein 286 369 - -
Viun10g02828 707 ProSitePatterns Heat shock hsp70 proteins family signature 1. 63 70 IPR018181 -
Viun10g02828 707 SUPERFAMILY Actin-like ATPase domain 61 242 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02828 Viun-Chr10 41030841 41033204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02828 52 707 Calmodulin-binding Proteins AT1G16030 85.366 0.0 1165