Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02826 ATGATCATCAACGTGAAGGAATCGACGATGGTGCGGCCGGCGGAAGAGGAGGAGCGGCGGGTGGTGTGGAACTCGAACGTGGACCTGGTGGTGCCGAATTTCCACACGCCCAGCGTCTACTTCTACAGAGCGAACGGCGCGTCCAACTTTTTCGACGGGAAGGTTCTGAAGGAGGCATTGAGCAAGGTGCTGGTGCCGTTCTATCCAATGGCCGGGAGGCTCCGGCGAGACGAAGACGGTCGCGTGGAGATTGATTGCGACGGTCAGGGGGTTCTCTTCGTGGAGGCGGACACCGGCGCCGTCATCGACGACTTCGGGGACTTTGCACCCACCCTTGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCGCAAGGGATCGAAACCTATCCCCTCTTGGTGTTACAGGTAACGCACTTCAAATGTGGAGGGGCTTCACTTGGAGTTGGTATGCAGCATCATGTAGCAGATGGAGCCTCGGGTCTTCACTTCATCAACACGTGGTCCGATGTGGCGCGTGGCTTGGATGTTTCCATTCCACCATTCATCGACCGAACAATACTCCGTGCCAGAGACCCACCTCGACCCGTTTTTGATCACATCGAATACAAACCCCCACCCGCCATGAAAACCAAACCACCCACAGAATCTGATACTGCAGCGGTCTCCATTTTCAAGCTCACACGTGACCAGCTCTCCACGCTCAAAGCCAAGTCCAAAGAAGATGGCAACACAATCACCTACAGCTCCTACGAGATGTTGGCAGGACACGTGTGGAGAAGCGTGTGCAAAGCAAGAGCACTTCCCGAAGATCAAGAAACCAAATTGTACATTGCAACCGACGGAAGATCAAGGCTTCAACCCTCTCCTCCACCGGGTTACTTCGGCAATGTCATATTCACCACCACACCAATCGCCGTGGCTGGTGATCTCATGTCAAAACCAACATGGTACGCTGCAAGCAGAATCCACAACGCGTTGCTGCGAATGGACAACGAGTATTTGAGATCCGCTCTTGATTATCTAGAGCTGCAACCTGATCTCAAAGCTCTGGTTCGTGGCGCACACACTTTCAAATGTCCGAATCTTGGCATCACCAGCTGGACCCGGCTTCCGATCCATGATGCTGACTTTGGTTGGGGAAGACCCATTTTCATGGGTCCTGGTGGAATTGCTTATGAGGGTTTATCTTTCATAATTCCAAACTCGATCAATGATGGTAGCTTGTCTGTGGCAATTGCTCTTCAACCCGACCATATGAAGGTGTTTAAGGAATACTTGTATGACATTTGA 1293 0.5267 MIINVKESTMVRPAEEEERRVVWNSNVDLVVPNFHTPSVYFYRANGASNFFDGKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPAVDYSQGIETYPLLVLQVTHFKCGGASLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPVFDHIEYKPPPAMKTKPPTESDTAAVSIFKLTRDQLSTLKAKSKEDGNTITYSSYEMLAGHVWRSVCKARALPEDQETKLYIATDGRSRLQPSPPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALLRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPNSINDGSLSVAIALQPDHMKVFKEYLYDI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02826 430 Pfam Transferase family 3 427 - -
Viun10g02826 430 Gene3D - 212 430 IPR023213 -
Viun10g02826 430 FunFam Tryptamine hydroxycinnamoyl transferase 207 428 - -
Viun10g02826 430 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Viun10g02826 430 Gene3D - 1 205 IPR023213 -
Viun10g02826 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02826 Viun-Chr10 41022676 41025532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02826 1 430 Monolignol Biosynthesis Gene Families AT5G48930 77.136 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02826 K13065 - gmx:100820075 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04124 5 48427151 48431831 Viun10g02826 10 41022676 41025532 PCT