Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02822 ATGAGAGGTTCATGGAAGCTCACATGTTCCCTCTTTCTTCTCATCTCCGCCGTCGCCACCGCCACCGACCACATTGTCGGTGCCAATCGTGGCTGGAACCCTGGCCTCAACTACACTCTCTGGGCCAACAACCACACTTTCTACGTCGGCGACCTTATCTCATTCAGGTACCAGAAAAACCAGTACAATGTGTTTGAGGTGAACCAAACTGGGTATGATAACTGCACCACAGAAGGGGCAGTGGGAAATTGGAGCAGTGGCAAGGATTTCATCCCTTTGAACAAGGCCAAGAAATATTACTTCATTTGTGGGAATGGCCAATGCTTCAGTGGAATGAAGGTTTCTGTTACTGTTCTTCCTCTTCCTCCACCTCCCACCTCTGCAATTTCTGCTGAACATTCAACGCCACACTCTGCTTCTTCTCTGCTCTTCAAACGCTCTCTGTTGCTTTCTTCTCTTTTGGCTTGTTTTGGATCTGTCTTCATGTAA 489 0.4806 MRGSWKLTCSLFLLISAVATATDHIVGANRGWNPGLNYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKKYYFICGNGQCFSGMKVSVTVLPLPPPPTSAISAEHSTPHSASSLLFKRSLLLSSLLACFGSVFM 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02822 162 Gene3D - 20 121 IPR008972 -
Viun10g02822 162 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Viun10g02822 162 FunFam Lamin-like protein 20 121 - -
Viun10g02822 162 PANTHER BLUE COPPER PROTEIN 20 131 IPR039391 GO:0009055
Viun10g02822 162 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Viun10g02822 162 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02822 Viun-Chr10 41001637 41002662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02822 19 128 Phytocyanin Superfamily AT5G15350 46.429 2.90e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02822 - - vum:124835852 288.5