Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02816 ATGTCTCTAAAGATAGCAGCAGAAATTTATCCAAAATCACCATCAGAGACAGTGATGGAGCCATTGCTTGTGGTAAACGAATATGATGAAGATAGACATAAGGTGGCAGTAGAGAAACTTGAGAGGCTTTGTGAAGTTGGGCAGAGTGGAAAGCCATCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGAATCCGTCACTTTCAATTGCATGTCATGCTCGTTGCAGAATATGGAGAAGAAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTGAAAACAGTGACAAGAGGGAATTCGGTTTATGTAAAACTGGCCTATATTTTGGGGCTCAGAGTCTCCCCTCGGCACAGGAGATTTGGCATTGGCACAAAACTAGTTCAACATTTAGAAGAGTGGTGCAAGCAAAAAGGGGCCAAGTATGCATATATGGCAACTGATTGTACCAACGAGCCTTCGGTGAATCTGTTCACAAAAAAATGTGGCTACTCAAAGTTCAGGACTCTAACCATTCTGGTGCAACCTGTGCATGCTCACTACAAACCAATCAGCTCCAATGTTGCTGTGCTTCGTCTTCCACCACGCCTTGCAGGCTCCATGTATGACAAAATGTTTGCAAATTCAGAATTTTACCCAAAAGACAAAGACTCGATCTTGTGCAACAAGCTGAATCTGGGGACCTTCATGGCCATCCCCAAGAAGCACTTGTCAAAGTGTGATCCAAAAAGGGGCATTCTCCCTCCAAGCTACGCCATATTGAGCGTGTGGAACACCAAAGATGTGTTTAAGTTGCAGGTGAAGGGTGTGTCACCATTGGCACATGCGTGCTGCGTAGGTACGAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCGTTCCCAGATGTTTTTAGGCCATTTGGGGTTTATTTTGTGTATGGATTGCACATGGAGGGAAAGTGTGGTGCTCAACTGATGAAGTGTTTGTGTGCATTTGTGCATAACATGGGAAGAGATGGTGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCGGTGAGAGACGCAGTCCCACATTGGAGAAAGTTCTCATGGGCAGAGGACATGTGGTGCATTAAGAATCTTCACAAGGCTTCTTCTCAAAATTCTGATTGGTTCACTTCTAGATCCTCTTCACCAGTGATATTTGTTGATCCTAGAGACTTTTGA 1206 0.4577 MSLKIAAEIYPKSPSETVMEPLLVVNEYDEDRHKVAVEKLERLCEVGQSGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEEGEVVGVIRGCVKTVTRGNSVYVKLAYILGLRVSPRHRRFGIGTKLVQHLEEWCKQKGAKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYDKMFANSEFYPKDKDSILCNKLNLGTFMAIPKKHLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFVYGLHMEGKCGAQLMKCLCAFVHNMGRDGGGCGAIVAELGQRDPVRDAVPHWRKFSWAEDMWCIKNLHKASSQNSDWFTSRSSSPVIFVDPRDF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02816 401 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Viun10g02816 401 Gene3D - 31 169 - -
Viun10g02816 401 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Viun10g02816 401 CDD NAT_SF 74 144 - -
Viun10g02816 401 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
Viun10g02816 401 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 171 IPR016181 -
Viun10g02816 401 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 20 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02816 Viun-Chr10 40955217 40957680 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun10g02816 Acetyltransf_1 2.1e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02816 - - gmx:100802670 764.222