Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02809 ATGTCCCTCGGACACCATATTCCTCAAAAGCATCAATCTTTCTCATCTGGGTTCTTCCCATCTCCACCAATTCAGAATGTCCATCCTCTCCTGGCCAAATTAGTTACACTCTCATCAACACATTTCCCAACTTTTCCCACCATGGAACCGAACAACCAACCCGACCAACCTAACCCCAGAAACATAATCTTCAACAAATACGAAATGGGTCGGGTCCTGGGGCAGGGGAACTTCGCCAAGGTCTACCACGGCAGAAACCTCCTCACCAACGACAACGTCGCCGTCAAGGTCATCAAGAAAGAGAAGCTCAAGAAAGAGCGATTGGTGAAGCAGATCAAGCGCGAGGTCTCGGTCATGAAACTGGTGCGGCATCCCCACATCGTTCAGCTCAAGGAAGTCATGGCCACCAAGGGAAAAATCTTCCTCGTCATGGAATACGTCAGGGGCGGCGAACTCTTCACCAAGGTCAACAAAGGAAAACTCTCCGAAGACCTCGCCAGAAAGTACTTCCAACAACTCATCAGCGCCGTCGACTACTGCCACAGCCGCGGCGTCACCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTGGACCAGAACGAGGACCTCAAAGTCTCCGACTTTGGCCTCTCGGCGCTGCCGGAGCAGCGCCGCGCCGACGGCATGCTCGTGACCCCGTGCGGGACCCCTGCCTACGTGGCGCCGGAGGTTCTGAAGAAAAAGGGTTACGACGGTTCAAAGGCTGATATTTGGTCCTGTGGCGTAATTCTCTACGCCTTGCTCTGCGGCTATTTACCCTTCCAAGGTGAGAACGTTATGAGAATCTACCGGAAAGCGTTCAGAGCACAGTATGAGTTACCGGAATGGGTTTCGCCGCCGGCCAAAAATCTGATTTCGAATCTCCTCGTTGCTGATCCTGCCAAGAGGTATTCCATTCCCGAGATAATGAAAGACCCCTGGTTTCAATTCGGGTTCATGAGACCCATTGCGTTTTCGATCAAGGAATCCGTAGAAGACAACATTCATTATTTCGACGATGTGGACAACAACAACAACGAGGAGGACGAGGTTTCAATGAGGAAACCCAGTAGGCCGTTTTACAACGCGTTTGAGATAATCTCGTCGTTGTCGCACGGGTTTGACCTCAGGAGTTTGTTCGAGACGAGGAAGCGGTCGCCGTCGATGTTTATCTGTAAATTTTCGGCTTCGGCGGTGATGGCGAAGGTGGAGGCTGCGGCGAAGAAGCTGAATTTTAAAGTGACGGGGAAGAAGGAGTTCGTGGTGAGGATGCAGGGGGCGGAAGAGGGGAGGAAGGGGAGGTTGGGGATGACGGTGGAGGTTTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCTAAGTCCGCCGGCGACACTCTGGAGTATATTAAATTGTGTGAGGAACAAATGAGACCATCTCTGAAAGACGTTGTCTGGAGCTGGCAGGGAGATAGATAG 1479 0.526 MSLGHHIPQKHQSFSSGFFPSPPIQNVHPLLAKLVTLSSTHFPTFPTMEPNNQPDQPNPRNIIFNKYEMGRVLGQGNFAKVYHGRNLLTNDNVAVKVIKKEKLKKERLVKQIKREVSVMKLVRHPHIVQLKEVMATKGKIFLVMEYVRGGELFTKVNKGKLSEDLARKYFQQLISAVDYCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVMRIYRKAFRAQYELPEWVSPPAKNLISNLLVADPAKRYSIPEIMKDPWFQFGFMRPIAFSIKESVEDNIHYFDDVDNNNNEEDEVSMRKPSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFICKFSASAVMAKVEAAAKKLNFKVTGKKEFVVRMQGAEEGRKGRLGMTVEVFEVAPEVAVVEFSKSAGDTLEYIKLCEEQMRPSLKDVVWSWQGDR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02809 492 FunFam Non-specific serine/threonine protein kinase 362 486 - -
Viun10g02809 492 SMART serkin_6 67 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02809 492 Gene3D Kinase associated domain 1, KA1 363 487 - -
Viun10g02809 492 ProSiteProfiles NAF domain profile. 362 387 IPR018451 GO:0007165
Viun10g02809 492 ProSiteProfiles Protein kinase domain profile. 67 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02809 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Viun10g02809 492 Gene3D Transferase(Phosphotransferase) domain 1 147 324 - -
Viun10g02809 492 FunFam Non-specific serine/threonine protein kinase 59 146 - -
Viun10g02809 492 Pfam NAF domain 366 421 IPR004041 GO:0007165
Viun10g02809 492 FunFam Non-specific serine/threonine protein kinase 60 361 - -
Viun10g02809 492 SUPERFAMILY Protein kinase-like (PK-like) 63 322 IPR011009 -
Viun10g02809 492 Coils Coil 95 115 - -
Viun10g02809 492 ProSitePatterns Protein kinases ATP-binding region signature. 73 100 IPR017441 GO:0005524
Viun10g02809 492 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 58 482 - -
Viun10g02809 492 CDD CIPK_C 368 482 - -
Viun10g02809 492 Pfam Protein kinase domain 67 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02809 492 Gene3D Phosphorylase Kinase; domain 1 51 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02809 Viun-Chr10 40903470 40905442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02809 60 491 CBL-interacting serine-threonine protein kinases AT5G10930 62.642 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun10g02809 Pkinase 5.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02809 - - vun:114167214 936.406