Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02789 ATGGCAGCAAAGACGGTGTGCGTGACTGGTGCAGGAGGATTCGTGGCGTCTTGGCTTGTTAAGCTTCTTCTCTCCAAAGGCTACAATGTCCATGGAACTGTGAGACAACCCGGTAGTGAGAAATACGAGCACTTGCAGAAACTGGAGGGAGCTTCTGAAAACCTCACACTCTTCAAGGCAGATCTCTTGAATTACGATTCTATTCTCTCAGCAATTGCTGGATGCGATGCAGTTTTCCATGTCGCAAGCCCTGTACCCTCAACTATTGTTCCCAACCCTCAGGTGGAGGTGATTGAACCTGCTGTGAAAGGAACCACTAATGTACTTCAAGCTTGTCTTGAAGCTAAAGTACAACGAGTGGTCTATGTGTCATCGGTATCTGCTATTTGCGTTGGCCCGAATATGCCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAGAAAAACTCAGAACTGGTACTGTTATTCAAAGACGGAGGCAGAGGAGCAGGCCCTGGAGTTTGGAAAAAGAACTGGACTTGATGTGGTAAGCATTTGCCCTTCCCTTGTGTTGGGGCCAATTTTGCAGTCAACCACTGTGAATGCAAGTAGCTTGGTTCTCCCCAAACTTTTGAAAGCTTTACTGAGGTGGATGATTACTTACAGTTCAGCTCAGAGAAACTGGAAAGGTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTTGAGAGCTATCGAGAGGCTGGCCTCCTGCAATTAG 768 0.4622 MAAKTVCVTGAGGFVASWLVKLLLSKGYNVHGTVRQPGSEKYEHLQKLEGASENLTLFKADLLNYDSILSAIAGCDAVFHVASPVPSTIVPNPQVEVIEPAVKGTTNVLQACLEAKVQRVVYVSSVSAICVGPNMPKDKVIDESYWSDKDYCRKTQNWYCYSKTEAEEQALEFGKRTGLDVVSICPSLVLGPILQSTTVNASSLVLPKLLKALLRWMITYSSAQRNWKGWVGNTGRWRKHSLILLRAIERLASCN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02789 255 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 211 - -
Viun10g02789 255 FunFam Dihydroflavonol reductase 3 222 - -
Viun10g02789 255 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 224 IPR036291 -
Viun10g02789 255 CDD FR_SDR_e 6 211 - -
Viun10g02789 255 Pfam NAD dependent epimerase/dehydratase family 6 215 IPR001509 -
Viun10g02789 255 Gene3D - 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02789 Viun-Chr10 40778688 40786982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02789 6 201 Monolignol Biosynthesis Gene Families AT2G33590 66.837 2.04e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02789 - - gmx:100784817 347.051