Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02788 ATGGCAGCAAAGACGGTGTGCGTGACTGGTGCAGGAGGATTCGTGGCGTCTTGGCTTGTTAAGCTTCTTCTCTCCAAAGGCTACAATGTCCATGGAACTGTGAGACAACCCGGTAGTGAGAAATACGAGCACTTGCAGAAACTGGAGGGAGCTTCTGAAAACCTCACACTCTTCAAGGCAGATCTCTTGAATTACGATTCTATTCTCTCAGCAATTGCTGGATGCGATGCAGTTTTCCATGTCGCAAGCCCTGTACCCTCAACTATTGTTCCCAACCCTCAGGTGGAGGTGATTGAACCTGCTGTGAAAGGAACCACTAATGTACTTCAAGCTTGTCTTGAAGCTAAAGTACAACGAGTGGTCTATGTGTCATCGGTATCTGCTATTTGCGTTGGCCCGAATATGCCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAGAAAAACTCAGAACTGGTACTGTTATTCAAAGACGGAGGCAGAGGAGCAGGCCCTGGAGTTTGGAAAAAGAACTGGACTTGATGTGGTAAGCATTTGCCCTTCCCTTGTGTTGGGGCCAATTTTGCAGTCAACCACTGTGAATGCAAGTAGCTTGGTTCTCCCCAAACTTTTGAAAGGTGGTGACTCATTTGAAAATAAGATCCGTTGGATAGTCGATGTACGGGATCTAGTTGATGCAATACTTTTGGTGTACGAGAAGCATGAGGCAGAACGTAGATACATATGCAGTGCACACACCATCAAGACACGGGATTTGGTAGAGAAACTGAAGAGTATATATCCAAGCTACAAGTACCCTTCCAACTTTACTGAGGTGGATGATTACTTACAGTTCAGCTCAGAGAAACTGGAAAGGTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTTGAGAGCTATCGAGAGGCTGGCCTCCTGCAATTAGAATAA 960 0.4521 MAAKTVCVTGAGGFVASWLVKLLLSKGYNVHGTVRQPGSEKYEHLQKLEGASENLTLFKADLLNYDSILSAIAGCDAVFHVASPVPSTIVPNPQVEVIEPAVKGTTNVLQACLEAKVQRVVYVSSVSAICVGPNMPKDKVIDESYWSDKDYCRKTQNWYCYSKTEAEEQALEFGKRTGLDVVSICPSLVLGPILQSTTVNASSLVLPKLLKGGDSFENKIRWIVDVRDLVDAILLVYEKHEAERRYICSAHTIKTRDLVEKLKSIYPSYKYPSNFTEVDDYLQFSSEKLERLGWKYRSLEETLIDSVESYREAGLLQLE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02788 319 Gene3D - 1 319 - -
Viun10g02788 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 307 - -
Viun10g02788 319 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 317 - -
Viun10g02788 319 Pfam NAD dependent epimerase/dehydratase family 6 243 IPR001509 -
Viun10g02788 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 312 IPR036291 -
Viun10g02788 319 CDD FR_SDR_e 6 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02788 Viun-Chr10 40778688 40787033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02788 6 316 Monolignol Biosynthesis Gene Families AT2G33590 62.500 4.63e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02788 - - gmx:100784817 527.709