Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02784 ATGGAGGAGCTCTCATGGCAGAATAATTGGCACCTTCAAACGGAAATGGATTGCCAGAACGAGTTCTTCCCTATCAACGATGACTGTGACGACGATTTCTTCACCGACCTCATCCCGCCCACGCCGTTCTCCTCCGAAAGCGAAAGCGATCACTCCTTTCGCGCTTCCAACACTGTCCACAACACCTCGTTCCTCCCCGGCGCCGCCGTTAACGCCGCCGTTAACGCCGCCGTTAACGCCGTCGTCGCTTCCAAACGCTCCTCTCCCAGGACTTACATTCTCTCCTTCGATAGCTCAACGGTTGTACCCGCCACGCCCGAACCCTCCGTGCCTTCTTCCCCTTTACCTGCTAAACGGGCCCTCCACACTCTAAGCCCAACCGCCAGGCCCAATCAAGGATCTAAGAGAACCCGAACCTCTTCTCAGACCATCGATCATATCATGGCCGAGAGAAAGAGGAGGCAAGAACTCACCGAGAGATTCATAGCGCTCTCCGCCACCATCCCCGGCTTGAACAAGACGGACAAGGCTTCTGTGCTTCGAGCAGCGATCGATTATGTGAAGCAACTCAAAGAGAAGGTGGAGGAACTGGAGAAGCAAAACAGAAAGAGTGTTGCAGAGACAGTAATATTGGTGAATAAAACTGACTCAAATGGAAATGAAGACACCACCAACCCCACTGAAACCAACTGCAGCATCCTCCCGGAGATGGAAGCAAGAGTGTTGGGGAAGGAGGTGCTCATTGAGATTCACTGTGAGAAAGAATATGGTGTTGAGCTAAAAATATTGGACCATCTTGAAAATATTCATCTCTGTGTCACCGGTAGCAGTGTCTTGCCATTTGGAAATTCTGCTCTCTGCATTACCATCACAGCTCAGATGGGTGAGGAGTATGAGATGACAGTAAATGATATAGTGAAAAACCTGAAGCAAGTACTCTCAGAAGTTTCATTTGGTAAGCGCAGTGATCCGTACTAG 978 0.5031 MEELSWQNNWHLQTEMDCQNEFFPINDDCDDDFFTDLIPPTPFSSESESDHSFRASNTVHNTSFLPGAAVNAAVNAAVNAVVASKRSSPRTYILSFDSSTVVPATPEPSVPSSPLPAKRALHTLSPTARPNQGSKRTRTSSQTIDHIMAERKRRQELTERFIALSATIPGLNKTDKASVLRAAIDYVKQLKEKVEELEKQNRKSVAETVILVNKTDSNGNEDTTNPTETNCSILPEMEARVLGKEVLIEIHCEKEYGVELKILDHLENIHLCVTGSSVLPFGNSALCITITAQMGEEYEMTVNDIVKNLKQVLSEVSFGKRSDPY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02784 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 210 IPR036638 GO:0046983
Viun10g02784 325 Pfam Helix-loop-helix DNA-binding domain 146 191 IPR011598 GO:0046983
Viun10g02784 325 Gene3D - 139 210 IPR036638 GO:0046983
Viun10g02784 325 PANTHER BHLH TRANSCRIPTION FACTOR 52 314 - -
Viun10g02784 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Viun10g02784 325 SMART finulus 147 196 IPR011598 GO:0046983
Viun10g02784 325 Coils Coil 180 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02784 Viun-Chr10 40748526 40750675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02784 132 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.271 2.18e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun10g02784 HLH 5.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02784 - - vun:114166804 607.06