Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02755 ATGGAGAGTGCAATTAGAATAATCAACACGGCGATTGAAAGTAGTAGTGATTCAATTTCGGAAAAAGAAGAATGCCTCGTCCGTGGATTTGGTTCAGCGGTGGACAGTGCCGTAAGGAGTAGCACTGCGCCAAATTCAGAAGTATCCTCCGTCCATGGATTCGGTCGCGCAGTGGAGAATGGCATCAAGAGTTCCACTTCATCAAATTTGGAAGCACCGGAGAGTGCTGATAGTTTTGGTTGGACGGTGGAGAATGCAACGCGGAGTAGGGTTGCGCCAAATCCACCTCCTCTCTACGGTTACTCTTCGACAGTGGATCATGCCATTAGCAGCGACGTTGGTGTCGAAGCTGAAACTGAAGAGTCGCCCAGCGGCACCTTCTACGAAGGCTTCACGGACGCAAGGCGAGGGAAAGAACAACCCACATTGCGAGTGTTTTCTTTGGAGGAATTAAAATCTGCTACGAAGAATTTCAAACATGGCAACATTCTTGGAGAAGGAGGCTTTGGCAGTGTGTACTGGGGCCAACTATCGGATGGATCGCAAATTGCCGTTAAAAGATTGAATGTTCGGAGCAACATAACTGAGACATTTACGGTTGAACTTGAAATCTTGGCAAGAGTACGACACAAGAATCTTCTCAGTCTTCGTGGTTACTGTGCCGAAGGACAGGAACGGTTAATTGTGTATGAATATATGCAAAATCTGTGTCTCCACTCTAGTCTTCATGGACATTCATTGAAATGCCCTCTGGATTGGAATCATCGGATGAATATCGCAATTGGTTCAGCTGAAGGAATTGCGTACCTTCACCATCAAGCAACACCACATATCATCCACAGGGATATTAAATCAAGTAATGTGTTGCTGGATTCTGATTTCAGACCCAGGGTTGCTGATTTTGGGTTTGCTAAGTTGATCCCTGATGGAGCAACACATGTGACTACAAAAGTTATGGGAACTCGTGGCTATCTTGCACCAGAATATGCCATGTTAGGTCAAGCAAAAGCGAGTTGTGATGTCTACAGTTTTGGTGTTCTCCTTCTGGAACTCGTGAGTGGCAGAGGACCAATCAAAATGCTTAGTTTCGCAGTGAGGAGATCGATAGTTGATTGGGCATTGCCATTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTAAATGGTAACTATGTGGAGGAAGAGCTTAAAAGAGTTGTTTTAATTGCACTTATTTCTGCTCAGGATCTACCTGAGAAGAGACCAACCATGCTTGATGTGGTAGAGCTACTCAAGGGAGAGTCTAAGGATAAATTTTCTCACATAGAGAACAGTGAAATGTTCAGAAAAACTCTAGCTGCTGATGGAACTTCAGTTGCTGAAGATAGTTTAGACTACATCTCAGAAGAAAAAAAATTAGAACGCCCGTTGAGAAAGAATGCTTCGTGTTTTTTTTGTTCTTGCTGCAATTTTCAAGTCAATACTCGGAGCCGTTTCTTAGATTGGCTTGGGTATGTTTGCTTCATGTGTAATTGA 1524 0.437 MESAIRIINTAIESSSDSISEKEECLVRGFGSAVDSAVRSSTAPNSEVSSVHGFGRAVENGIKSSTSSNLEAPESADSFGWTVENATRSRVAPNPPPLYGYSSTVDHAISSDVGVEAETEESPSGTFYEGFTDARRGKEQPTLRVFSLEELKSATKNFKHGNILGEGGFGSVYWGQLSDGSQIAVKRLNVRSNITETFTVELEILARVRHKNLLSLRGYCAEGQERLIVYEYMQNLCLHSSLHGHSLKCPLDWNHRMNIAIGSAEGIAYLHHQATPHIIHRDIKSSNVLLDSDFRPRVADFGFAKLIPDGATHVTTKVMGTRGYLAPEYAMLGQAKASCDVYSFGVLLLELVSGRGPIKMLSFAVRRSIVDWALPLVCEKKFSEIADPRLNGNYVEEELKRVVLIALISAQDLPEKRPTMLDVVELLKGESKDKFSHIENSEMFRKTLAADGTSVAEDSLDYISEEKKLERPLRKNASCFFCSCCNFQVNTRSRFLDWLGYVCFMCN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02755 507 SUPERFAMILY Protein kinase-like (PK-like) 141 427 IPR011009 -
Viun10g02755 507 FunFam PTI1-like tyrosine-protein kinase At3g15890 233 443 - -
Viun10g02755 507 PANTHER OS01G0750732 PROTEIN 131 434 - -
Viun10g02755 507 SMART serkin_6 158 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02755 507 Gene3D Phosphorylase Kinase; domain 1 128 232 - -
Viun10g02755 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Viun10g02755 507 Pfam Protein kinase domain 159 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02755 507 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Viun10g02755 507 FunFam serine/threonine-protein kinase PBS1-like 129 232 - -
Viun10g02755 507 Gene3D Transferase(Phosphotransferase) domain 1 233 445 - -
Viun10g02755 507 CDD STKc_IRAK 164 429 - -
Viun10g02755 507 ProSiteProfiles Protein kinase domain profile. 158 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02755 Viun-Chr10 40557121 40562404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02755 146 462 Trihelix Transcription Factor Family AT1G70460 45.963 6.55e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Viun10g02755 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02755 - - vun:114167562 981.859