Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02698 ATGAAGAAAGAAAGCAGTGTTACCCTGAAAACTGGGGAGCTACCTGGTCGAGTGACACGGGCTCGGGCTGCTGCTCATTGTTCATCAGGAAAGCTACCTCCTTTGAAAGAGAGAGCACAGCAAAATCAGAAACAGTTATCCAGAGTTAATTCAAAAAGAGCAGCTTCTGATAATACATGTGTTCCTCGTAAAAGGAGGACCGTTCTTCAGGATGTTACAAATGTTTGCTGTGAAAATGCTTACACGAGTTGTATCGACTCAAATAAAATTCAGGCTAAGAAAAGAAGGCTTTCTAAGGCTGGTCAAGTTAATGACTCCAAAGTGGTTCCTTCTGAGGCTGTAGATTCACTGCAATTTGAAGTTGACTCGAAAGAAAAACGTTTGCAGGAAACGGCATTGAAATCAGAAGATACTATGTGCTCAATTAATTTGGAACAGAAAGAACTTCTGCGGCCAAGTTCCAATGAGTGTAACATGGATGTTCGATTGCCTGAAAGTCAGATGTCTGGAATATCTGGTCAACCTTTGATTTCTCAGAAGAAAGCCAAGGAAGATAACCTTTTGAAAGTTTTAACTGCGTTGAAGGATCAAGACATCACTAGCATAGACGATGATCTTGGGGATCCTCTATTGTGCAGCCTCTATGCTGCTGATATCTACGACACCATGCGTGTTGCTGAGCTTGCAAGAAGGCCTCATCCTAATTTTATGGAGATGGTGCAGCAAGATATCACTCAAAGCATGCGTGGAATACTGGTTGATTGGCTTGTAGAGGTTTCGGAGGAATACAAATTGGTTACAGACACTCTTTACCTCACTGTGTACCTCATAGATTGGTTCCTCTCCAAAAACTACATTGAAAGACAGAGACTTCAGCTACTTGGTATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCGCGTATTGAGGATTTCTGCTTCATTACAGACAATACATACACCAAAGCTGAGGTGCTGAAAATGGAGAGTCAAGTGTTGAAGTCGTCTGAATATCAACTGTTTGCTCCCACTATACAAACATTTCTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCATACAAGGATCCAAACCTTGAATTAGAGTACCTGGCCAATTACCTAGCTGAACTAACACTCATGGATTATGGTTTCTTGAATTTCCTTCCCTCTATCATTGCTGCATCAGCAGTGTTTCTTGCCCTGTGGACACTGGATCAGTCAAACCACCCATGGAATCCAACACTTCAACACTATGCCAGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCACTGCAAGACCTGCAGCTGAATACTGATGGTTGCCCTCTAACTGCCATTCGCACAAAATATAGACAAGACAAGTTCAAGTGTGTAGCAGCTCTGTCTTCACCAAAAGTGCTTGAAACTTTGTTCTGA 1434 0.424 MKKESSVTLKTGELPGRVTRARAAAHCSSGKLPPLKERAQQNQKQLSRVNSKRAASDNTCVPRKRRTVLQDVTNVCCENAYTSCIDSNKIQAKKRRLSKAGQVNDSKVVPSEAVDSLQFEVDSKEKRLQETALKSEDTMCSINLEQKELLRPSSNECNMDVRLPESQMSGISGQPLISQKKAKEDNLLKVLTALKDQDITSIDDDLGDPLLCSLYAADIYDTMRVAELARRPHPNFMEMVQQDITQSMRGILVDWLVEVSEEYKLVTDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMESQVLKSSEYQLFAPTIQTFLRRFLRAAQASYKDPNLELEYLANYLAELTLMDYGFLNFLPSIIAASAVFLALWTLDQSNHPWNPTLQHYASYKASDLKTTVLALQDLQLNTDGCPLTAIRTKYRQDKFKCVAALSSPKVLETLF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02698 477 FunFam Mitotic cyclin 6 232 332 - -
Viun10g02698 477 Pfam Cyclin, C-terminal domain 347 469 IPR004367 -
Viun10g02698 477 CDD CYCLIN_AtCycA_like_rpt1 208 343 - -
Viun10g02698 477 PIRSF Cyclin_A_B_D_E 24 476 IPR046965 GO:0016538|GO:0044772
Viun10g02698 477 FunFam Cyclin A1 334 466 - -
Viun10g02698 477 Gene3D - 232 345 - -
Viun10g02698 477 MobiDBLite consensus disorder prediction 35 57 - -
Viun10g02698 477 MobiDBLite consensus disorder prediction 1 58 - -
Viun10g02698 477 PANTHER CYCLINS 152 458 IPR039361 -
Viun10g02698 477 SMART cyclin_7 254 338 IPR013763 -
Viun10g02698 477 SMART cyclin_7 351 439 IPR013763 -
Viun10g02698 477 Pfam Cyclin, N-terminal domain 218 343 IPR006671 -
Viun10g02698 477 CDD CYCLIN_AtCycA-like_rpt2 347 461 - -
Viun10g02698 477 SUPERFAMILY Cyclin-like 347 472 IPR036915 -
Viun10g02698 477 SUPERFAMILY Cyclin-like 207 343 IPR036915 -
Viun10g02698 477 SMART Cyclin_C_2 347 470 IPR004367 -
Viun10g02698 477 Gene3D - 218 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02698 Viun-Chr10 40243876 40249218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02698 1 477 Core Cell Cycle Gene Families AT1G80370 55.242 1.22e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02698 K06627 - gmx:100789757 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02698 10 40243876 40249218 Viun10g02698 10 40243876 40249218 ECH