Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02688 ATGGGTGTGAACTTAGCATGCAACAATGGTTGCAGCATGAAGATCCAAAGTGAGATACAAATGGCAATGCCAGTGCCAGCAGCCATGGAAATCCACAAGGTTCAGTTGCCACCAGAACGCACCACCTTGCAGAAACTCAGACACAGACTCTCTGAGATCTTCTTCCCCGATGACCCTCTTCACAGGTTCAAGAACCAAACTTGCTTCATGAAACTTCTCCTTGCTCTTCAATACCTCTTCCCCATTTTCCAATGGGCCCCTCTCTACAACCTTTCCCTTCTCCGCTCTGACTTCATCTCAGGTCTCACCATTGCAAGCCTCGCCATTCCTCAGGGTATCAGCTATGCTAAGCTAGCGAACTTGCCACCCATTCTTGGATTATATTCCAGCTTTGTGCCTCCGTTGATATATTCCCTGCTTGGGAGTTCTAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAACTGAGACTATTTCTTACACTCAAGATCCTATTCTCTATCTCAAAATGGCTTTCACTGCCACTTTTTTTGCCGGTTTGTTCCAATCTTCTCTGGGTATATTAAGATTAGGTTTTGTGATTGATTTTCTCTCAAAGGCAACTCTGGTGGGTTTCATGGCTGGTGCAGCGATTATTGTTTCACTGCAACAGCTGAAAGGGTTGCTTGGGATTGTTCATTTCACCAACAAGATGCAAATAACGCCTGTGCTTATCTCTGTTTTCAAGCAAAGAGAAGAGTGGTCATGGCAAAACCTTGTGCTGGGATTCAGTTTTCTAATATTCCTGTTGACAACAAGGCAAATTAGCTTGAGGAAGCCAAAACTATTCTGGGTTTCAGCAGCTGCGCCGTTGACATCAGTAATTCTGTCAACAATTTTAGTATTTTTTCTGAGAAATAAGACACATAAAATTGCTATTATCGGTGAATTGCCAAAAGGACTTAATCCACCATCATCTAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTCTCAAAACTGGACTTGTCACTGGGATTTTGTCTCTCACTGAAGGAATTGCAGTGGGAAGAACATTTGCTGCACTGAAGAACTACCAGGTAGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGTTCTTGTTCTTCATGCTATGTCACAACAGGGTCATTTTCTCGATCAGCTGTGAACTTCAATGCTGGGGCACAGACAGCAGTATCAAATATAATCATGGCATCGGCAGTTCTAGTGACCCTTTTGTTTCTGATGCCGTTGTTCTATTACACACCGAATGTAGTCTTAGGAGCCATTATAATCACTGCTGTTGTAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTGTTCATTTCAGTGCCTCTAGGCCTTGGAATAGCGGTGGGGATATCAGTGTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCGGGGACACCAATATTCCACAACCTAAACCAATATAGAGAAGCTTTGAGGATTCCTTCATTTATCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACCTGCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGAGTAAAAGCAAACAATGAAAGTACATTGAAGTGTATAATTTTGGACATGACGGCTGTTACAGCCATAGACACAAGTGGAATCGATACTCTATGTGAACTTAGAAAGGTGCTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGGAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGTGTCTATCTCACTGTTGGAGAAGCTGTGGCTGACATTTCATCTTCATGGAAAGCTCAGCCTTGA 1971 0.4252 MGVNLACNNGCSMKIQSEIQMAMPVPAAMEIHKVQLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTCFMKLLLALQYLFPIFQWAPLYNLSLLRSDFISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLTETISYTQDPILYLKMAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKQREEWSWQNLVLGFSFLIFLLTTRQISLRKPKLFWVSAAAPLTSVILSTILVFFLRNKTHKIAIIGELPKGLNPPSSNMLYFNGPYLALALKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNFNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLGAIIITAVVGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVGISVFKILLHVSRPNTLVLGNIPGTPIFHNLNQYREALRIPSFIILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGIDTLCELRKVLDKRSLQLVLANPVGNVMEKLHQSNILDSFGLKGVYLTVGEAVADISSSWKAQP 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02688 656 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Viun10g02688 656 Pfam Sulfate permease family 94 473 IPR011547 GO:0016020
Viun10g02688 656 Pfam STAS domain 526 644 IPR002645 -
Viun10g02688 656 FunFam Sulfate transporter 31 505 651 - -
Viun10g02688 656 ProSiteProfiles STAS domain profile. 525 648 IPR002645 -
Viun10g02688 656 Gene3D STAS domain 505 650 IPR036513 -
Viun10g02688 656 PANTHER SULFATE TRANSPORTER 45 648 IPR001902 GO:0016020|GO:0055085
Viun10g02688 656 SUPERFAMILY SpoIIaa-like 530 647 IPR036513 -
Viun10g02688 656 CDD STAS_SulP_like_sulfate_transporter 526 641 - -
Viun10g02688 656 NCBIfam sulfate permease 81 644 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02688 Viun-Chr10 40151635 40156185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02688 29 656 Inorganic Solute Cotransporters AT3G15990 76.190 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02688 K17471 - gmx:100780331 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02688 10 40151635 40156185 Viun10g02688 10 40151635 40156185 ECH
Viun5g03940 5 47402409 47407275 Viun10g02688 10 40151635 40156185 PCT