Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02684 ATGAGTGTGGTGGGTTTTGATTTCGGTAATGAGAGCTGCGTTGTTGCAGTTGCGAGGCAAAGAGGGATTGACGTTGTGCTTAATGACGAGTCCAAACGTGAAACGCCTGCTATTGTGTGCTTTGGTGAGAAGCAACGTTTCATTGGCACTGCTGGTGCTGCCTCCAGTCTGATGAACCCTAAGAATTCAACATCACAGTTTAAGAGACTCATTGGTAGAAAATTCTCTGATCCCGAATTGCAACGGGATCTTAAGGCATTGCCATTTCTTGTTACCGAGGGGAATGATGGGTACCCGTTGATTCACGTGCAATACTTGGGTGAGGCTAAGAAATTTACACCTACACAAGTGTTTGGTATGATGTTGTCGAATCTTAAGGAAATTGCAGAGAAGAATCTCACGACGGCTGTTGTTGATTGTTGCATTGGAATTCCAGTTTATTTTACTGATTTGCAGAGGAGGGCGGTGTTGGATGCGGCCACGATTGTTGGTCTACACCCACTTCAATTGATTCATGAAATGACTGCAACTGCCTTGGCGTATGGGATTTATAAAACGGACCTTCCAGAAAATGATCAACTGAATGTTGCTTTTGTTGATGTTGGGCATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAGAAGGGGCAGTTGAAAGTGTTGGCTCATTCGTATGATAGGTCTTTAGGTGGTAAGGATTTTGACGAGGTTTTGTTCCATCACTTTGCTACTAAGTTCAAGGAGGAGTATAAGATTGATGTTTGCCAGAATGCTAGGGCTTCCTTAAGGTTGAGGGCTGCCTGTGAGAAGATGAAGAAAATGCTTAGTGCAAATAGTGAGGCACCTCTCAACATAGAGTGTTTGATGGACGAGAAGGATGTCCGTGGCTTCATGAAGCGAGATGAGTTTGAGCAACTAAGTCTTCCAATTCTGGAACGTGTCAGGGGACCTTTGGATAAGGCACTTGCTGAAGCAAATCTTACCATTGAAAATGTGCATACGGTTGAGGTGGTTGGTTCAGGTTCTCGTGTACCCGCCGTAACCAAAATATTGACAGAGTTTTTCAAGAAAGAGCCTAGGAGAACAATGAATGCTAGTGAGTGTGTTGCTAAGGGTTGTGCTTTGAAATGTGCAATTCTTAGTCCCACGTTTAAAGTACGAGAATTTCAGGTCAATGAAAGCCTTCCTTTCTCGATTTCCCTTGCATGGAAAGGTACTGGTCCAGATGCACAGGACAATGCACCACAAAATCAGCAGAGTTCCCTTGTTTTTCCCAGGGGTAATCCCATACCAAGTACCAAAGCTCTAACATTCTACAGGTCAGGAACATTTTCTATTGATGTACATTATGGCGATGTAAGTGAGCTGCAAACACCTACCAAGATTAGCACATATACTATTGGTCCGTTCCAAACTGCAAATAGTGAAAGGACAAAAGTGAAAGTGAAAGTTCGTTTGAATATTCATGGAATTGTATCTCTGGAGTCTGCCATGCTCCTGGAAGAAAACGAAGTTGAGGTTCCGATTACCAAAGAATCAGCAGGGCAAAATACTAAGCCAAACATTAACGAAGCCCCAATTGACGCAGCTACACCTCCAGCCTCCAATGACACTAGTGCAAATGTGCAAGATGCAAAGGTTAGTACTGATGCTTCTGGGGCTGAAAATGGTGTTCCTCAGAATGAAGATAAGCCTCTGAAGACAAATACTGATACCAAGGCTCCAAAGAAAAAGGTTAAAAAAACAAGCATTGCTGTATCAGAGTTAGTTTACGGAGCAATGGTCTCTTCGGATGTCCAAAAGGCAATAGAGAAGGAGTTTGAAATGGCTTTGCAGGATCGTGTGATGGAGGAAACGAAGGACAAGAAAAATGCAGTGGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGCTTCAGAGAGAGAAGATTTTACGGCCAAACTCCAGGAAGTGGAAGATTGGCTTTATGATGAGGGTGAAGATGAAACTAAAGGTGTATATATTGCTAAGCTTGAAGAACTAAGAAAGAAAGGTGATCCCATTGAAGGGCGTTACAAAGAATACATGGAGAGGGGTAGTATAATTGAGCAATTCATGTATTGTATAAATAGTTATAGAGAAGCTGCAAAGTCGAAGGACCCCAAATTTGATCACATTGACATTAATGAGAAACAGAAGGTCATAAATGAATGTGTTGAAGCTGAGAAATGGTTTATGGAGAAGCAACAACAACAAAGCTCACTTCCAAAATATGTCAACCCTGTACTCTTGTCAGCTGAAATAAGAAAGAAAGCTGAGATTGTTGACAGGTTCTGCAAGCCAATTATGACAAAACCAAGGCCAACCAAACAAGGTACTTCCACTGGATCAGGAACCCCATCTCCGCGGGGTGATGAGCAGCAACACCCTCGAGGGGATGCTAATGCCAGCAGTAACGAAAATACTGGGGATAGAAGTAGCCAGGCTGCACCAGCTTCTCCTCAACCAATGGAGACTGATTAG 2529 0.4286 MSVVGFDFGNESCVVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASSLMNPKNSTSQFKRLIGRKFSDPELQRDLKALPFLVTEGNDGYPLIHVQYLGEAKKFTPTQVFGMMLSNLKEIAEKNLTTAVVDCCIGIPVYFTDLQRRAVLDAATIVGLHPLQLIHEMTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGKDFDEVLFHHFATKFKEEYKIDVCQNARASLRLRAACEKMKKMLSANSEAPLNIECLMDEKDVRGFMKRDEFEQLSLPILERVRGPLDKALAEANLTIENVHTVEVVGSGSRVPAVTKILTEFFKKEPRRTMNASECVAKGCALKCAILSPTFKVREFQVNESLPFSISLAWKGTGPDAQDNAPQNQQSSLVFPRGNPIPSTKALTFYRSGTFSIDVHYGDVSELQTPTKISTYTIGPFQTANSERTKVKVKVRLNIHGIVSLESAMLLEENEVEVPITKESAGQNTKPNINEAPIDAATPPASNDTSANVQDAKVSTDASGAENGVPQNEDKPLKTNTDTKAPKKKVKKTSIAVSELVYGAMVSSDVQKAIEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIASEREDFTAKLQEVEDWLYDEGEDETKGVYIAKLEELRKKGDPIEGRYKEYMERGSIIEQFMYCINSYREAAKSKDPKFDHIDINEKQKVINECVEAEKWFMEKQQQQSSLPKYVNPVLLSAEIRKKAEIVDRFCKPIMTKPRPTKQGTSTGSGTPSPRGDEQQHPRGDANASSNENTGDRSSQAAPASPQPMETD 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02684 842 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 591 IPR029047 -
Viun10g02684 842 Pfam Hsp70 protein 3 694 IPR013126 GO:0005524|GO:0140662
Viun10g02684 842 PRINTS 70kDa heat shock protein signature 140 160 - -
Viun10g02684 842 PRINTS 70kDa heat shock protein signature 2 15 - -
Viun10g02684 842 PRINTS 70kDa heat shock protein signature 30 42 - -
Viun10g02684 842 PRINTS 70kDa heat shock protein signature 332 348 - -
Viun10g02684 842 PRINTS 70kDa heat shock protein signature 363 383 - -
Viun10g02684 842 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 597 693 IPR029048 -
Viun10g02684 842 FunFam Heat shock 70 kDa protein 4 230 313 - -
Viun10g02684 842 FunFam Heat shock 70 kDa protein 4 594 704 - -
Viun10g02684 842 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Viun10g02684 842 Gene3D - 5 374 - -
Viun10g02684 842 Gene3D - 595 703 IPR029048 -
Viun10g02684 842 Gene3D - 38 113 - -
Viun10g02684 842 CDD HSPA4_like_NDB 2 381 - -
Viun10g02684 842 FunFam Heat shock 70 kDa protein 4 107 207 - -
Viun10g02684 842 MobiDBLite consensus disorder prediction 781 842 - -
Viun10g02684 842 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 710 792 IPR029048 -
Viun10g02684 842 MobiDBLite consensus disorder prediction 789 806 - -
Viun10g02684 842 FunFam Heat shock 70 kDa protein 4 38 113 - -
Viun10g02684 842 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 627 IPR029047 -
Viun10g02684 842 Gene3D - 186 360 - -
Viun10g02684 842 MobiDBLite consensus disorder prediction 532 556 - -
Viun10g02684 842 Gene3D Actin; Chain A, domain 4 230 313 - -
Viun10g02684 842 MobiDBLite consensus disorder prediction 813 842 - -
Viun10g02684 842 FunFam Heat shock 70 kDa protein 4 1 73 - -
Viun10g02684 842 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Viun10g02684 842 PANTHER HSC70CB, ISOFORM G-RELATED 1 841 - -
Viun10g02684 842 MobiDBLite consensus disorder prediction 511 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02684 Viun-Chr10 40133938 40139296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02684 4 438 Calmodulin-binding Proteins AT1G16030 34.475 6.47e-83 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02684 K09489 - gmx:100816539 1429.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02684 10 40133938 40139296 Viun10g02684 10 40133938 40139296 ECH
Viun5g03934 5 47382954 47387953 Viun10g02684 10 40133938 40139296 PCT