Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02683 ATGTCGAAAAAAATCTCAAAATCCCTCAAAGACTGTCTCACCAAAATCAAAACCTCCCAACGTTCCATGGTTCAATTATCCTCTAAGAAATGGGTTCCCAAAGGTTGCAAGCATCCTAGGACTCCTTCGATCGACATGGACAAAAACAAAAACATCATCAGCAAAAACACCACCAACGCTAAGGACGACGAAGCCATGTTAGCAGACATTGATCGCTTTCTCATTGAGAATTTCAAGAACCTGTTCCTCGATGACCATCGTGAAGAAACCACCACCAAAGAACAAAAATCTCCCAAACTTGACTCTATCAGATTTGACTCTTCTGCAAGGTTCGATGAGTCGCCACTGAACCTCTTCACAGACACAACAACCGAAGCGGGACTATCCAGTTTGACCATGTCCGAGCCTGAGGGCGTGGAAGAACAAACCACCGTTCCGAGTAATTGCGTGGTGGTCTTGGCCAACTCCGGCAGACCCACGGAGGATTTCCGTCGGTCCATGGAGGGTATGGTTGAAGCAAGATTGAAGAAAAGTGAAAAGGTGGATTGGGACTTCATGCAAGAGCTTTTGTTCTGCCACATGAATCTGAACCAAAAGAAGTGGCACAAGTTCATTCTCAACGCGTTTGTGGACGTCGCCACCACCCTACGCCAGTCACCGGAGATTTCTCCGACGAAGAGCCAGCCAGCGCAGAGCGTTCGGACTGTTAGAATCGGTAGAGAAGTAAGAAAAAAAACAAAGGAAGCAATCACCTTGGAATTTGGGTCACCCTAA 774 0.469 MSKKISKSLKDCLTKIKTSQRSMVQLSSKKWVPKGCKHPRTPSIDMDKNKNIISKNTTNAKDDEAMLADIDRFLIENFKNLFLDDHREETTTKEQKSPKLDSIRFDSSARFDESPLNLFTDTTTEAGLSSLTMSEPEGVEEQTTVPSNCVVVLANSGRPTEDFRRSMEGMVEARLKKSEKVDWDFMQELLFCHMNLNQKKWHKFILNAFVDVATTLRQSPEISPTKSQPAQSVRTVRIGREVRKKTKEAITLEFGSP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02683 257 Pfam Transcriptional repressor, ovate 158 216 IPR006458 -
Viun10g02683 257 NCBIfam uncharacterized plant-specific domain TIGR01568 150 217 IPR006458 -
Viun10g02683 257 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 57 216 IPR038933 GO:0045892
Viun10g02683 257 ProSiteProfiles OVATE domain profile. 152 215 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02683 Viun-Chr10 40129926 40130932 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun10g02683 Ovate 2.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02683 - - var:108320446 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02683 10 40129926 40130932 Viun10g02683 10 40129926 40130932 ECH
Viun5g03930 5 47361724 47362945 Viun10g02683 10 40129926 40130932 PCT