Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02674 ATGGAATTTTGGTCAGAATTTCTTGCAAGCAGTTCGGGAAGAGAGTTTGTAGCAGGTGGCTTCGGAGGCATCGCAGGTATATTTGCAGGTTATCCACTTGACACTCTCCGAATCAAATTACAGAACACAAAAAATGGCTCTGCTGTCACCATCTTTAAGCACATGGTGTTAAGGGAAGGAACATGTTCTTTGTACCGTGGCATGGCCGCACCATTAGCCACCGTTACTTTTCAGAATGCAATGGTTTTCCAAACGTACGCGGTTCTGTCAAGGGCGTGTGACTTATCTGTATCTCCTAAAGACCCTGCATCCTACAAGGGTGTTGCATTAGGAGGAACTGGCACAGGAGCACTTCAAAGTCTGTTACTTTCCCCTGTGGAGCTGATAAAAATTCGACTTCAGATGCAAAAAGAAAGCCAGATGGCAGAATCCATAAAGGGTCCTATAAGGCTGGCGAAACACATTTGGAGAAAAGAAGGCCTTCGAGGCATTTATCGAGGACTTGGTGTGACTGTGTTAAGAGATGGACCCTCTCATGGTTTATACTTCTGGACATACGAATACATGAGGGAACGACTCCACCCTGGTTGCAGAAAAAGTGGTGAAGAAAGTTTGCAGACTATGTTAGTAGCGGGAGGATCTGCAGGCGTGACTAGTTGGATCAGTTGCTACCCTTTGGATGTTGTGAAGAGTAGATTGCAGGCTCAAACACCCTCTTCTCTCAAGTACAAAGGCATCGTAGATTGTTTCAGAAAGAGTGTTAAAGAAGAAGGATACAGTGTGCTGTGGCGGGGTTTAGGAACTACAGTTGCCAGAGCTTTCATAGTAAATGGAGCCATATTCTCTGCGTATGAAGTTGCGCTCAGATTACTGTTTCGCAACCCAAGTATTCATACCAAAGAAACTATTTAG 912 0.4485 MEFWSEFLASSSGREFVAGGFGGIAGIFAGYPLDTLRIKLQNTKNGSAVTIFKHMVLREGTCSLYRGMAAPLATVTFQNAMVFQTYAVLSRACDLSVSPKDPASYKGVALGGTGTGALQSLLLSPVELIKIRLQMQKESQMAESIKGPIRLAKHIWRKEGLRGIYRGLGVTVLRDGPSHGLYFWTYEYMRERLHPGCRKSGEESLQTMLVAGGSAGVTSWISCYPLDVVKSRLQAQTPSSLKYKGIVDCFRKSVKEEGYSVLWRGLGTTVARAFIVNGAIFSAYEVALRLLFRNPSIHTKETI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02674 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Viun10g02674 303 Pfam Mitochondrial carrier protein 204 294 IPR018108 -
Viun10g02674 303 Pfam Mitochondrial carrier protein 12 91 IPR018108 -
Viun10g02674 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Viun10g02674 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 291 - -
Viun10g02674 303 FunFam Mitochondrial arginine transporter BAC2 11 301 - -
Viun10g02674 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Viun10g02674 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Viun10g02674 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Viun10g02674 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Viun10g02674 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Viun10g02674 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Viun10g02674 303 Gene3D Mitochondrial carrier domain 12 300 IPR023395 -
Viun10g02674 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Viun10g02674 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02674 Viun-Chr10 40085040 40087217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02674 1 301 Antiporters AT1G79900 67.869 3.95e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02674 K15109 - gmx:100812056 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02674 10 40085040 40087217 Viun10g02674 10 40085040 40087217 ECH