Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02655 ATGAGTCGCTCATTGAAAGCTTTCAACAAACACCTTACTCTCCTCCCTCTCCCTCTACACCTACGCACTTTTTCTACCCATCCCTTCATAACTTCCTCTTCTTTCCCTCTTTTCCCACATCACGTTTCCTTCCCCAGGTTCTCTTTCGCTCACCTTCGTCCACTCTCGACATCTGCACCTGCGACATTAATGGAGGTGGTGAGAGCAATTGCTAGGCAAGAACCTGCAGTTCATGAAAATGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGGAACTCATCTCAACAGCACAGCAGATATCTGATCTCTTGTGTGGCGGTGATGCACTAACAGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAGCCCTCTGCTGAATTTGTTGCTGGAATAATTGGGGTTTGGCTCAGTGGAGGTGTTGCTGTTCCCCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTGATAATTCGGATATATCTGCAATACTGAGTACTGAAGAGCATAGCGAATTAATGCAAAGCGTAGCCAATAAAAGCTCTTCCAAGTTTTTTCATCTTCCATCTGTTGTCAACATTTCTTCAGAGAACAACAGAAATGGACACTCACAGAATGGGAATGGGAAAATTCACGAAGACAGGATTTATTTGGATGATATCATAGGAGGATCAAGTGAAGAAGATCCAGCACTGATTTTGTACACCAGTGGGACTACAGGTAAACCTAAGGGTGTTGTTCATACACACAAAAGCATCATTTCCCAGGTCCAAACTTTGGCAAAAGCATGGGAGTACACATCTGCTGACAAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGCTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGCTCCTCGGTTGAGTTTTTGCCAAAATTTAGTGTGAGGGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGATGGTTCTAAGGCTGATGATGCTATAACCGTGTTCACTGGAGTTCCAACTATCTATGCCCGACTCATACAAGGTTACAATGCAATGGATCCTGAGCTTCAACAGGTTTCAGCATCTGCTGCAAATAACTTGCGTCTTATGATGTGTGGGTCCTCAGCGCTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCAAATCCATTGAAAGGTGAGCGCAAGCCAGGGACTGTGGGCAAACCATTTCCTGGTATACAGGTCAAGATCATTGCAGATGAAGAGAGTGAGAATGACAAAAATGTAATGGGTGAACTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGATAACGAAGGAATCATTTACTGATGATGGATTCTTCAAGACTGGAGACGCAGTTACTACAGATGAAGACGGATATTACATCATTTTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTATAAGTTATCTGCATTAGAAATTGAATCAGTAATCATAGAGCATCCAGCTATCTTAGAATGCTGCGTTTTAGGATTACCAGACAACGACTATGGAGAGATTGTAGGTGCAATCGTTGTGCCACATGCTGATGCTAAAAAGAAGAGAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTAACCATATGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTAAACTAATCCTGTGGGAAAAACTCCCTCGTAATGCCATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAGCTGGTGGTTTCAGAAACAGTGAACACCATTTGA 1845 0.4276 MSRSLKAFNKHLTLLPLPLHLRTFSTHPFITSSSFPLFPHHVSFPRFSFAHLRPLSTSAPATLMEVVRAIARQEPAVHENVAIRADQKSYSYKELISTAQQISDLLCGGDALTGNLGGARIGIVAKPSAEFVAGIIGVWLSGGVAVPLATSYPEVELLYVIDNSDISAILSTEEHSELMQSVANKSSSKFFHLPSVVNISSENNRNGHSQNGNGKIHEDRIYLDDIIGGSSEEDPALILYTSGTTGKPKGVVHTHKSIISQVQTLAKAWEYTSADKFLHCLPLHHVHGLFNGLMAPLYAGSSVEFLPKFSVRGVWQRWRESYPTDGSKADDAITVFTGVPTIYARLIQGYNAMDPELQQVSASAANNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEESENDKNVMGELCVKSPSLFKEYWKLPEITKESFTDDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAILECCVLGLPDNDYGEIVGAIVVPHADAKKKRDQESKPVLSLEELTIWAKDKIAPYKIPTKLILWEKLPRNAMGKVNKKELKKLVVSETVNTI 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02655 614 ProSitePatterns Putative AMP-binding domain signature. 238 249 IPR020845 -
Viun10g02655 614 Pfam AMP-binding enzyme C-terminal domain 511 596 IPR025110 -
Viun10g02655 614 Pfam AMP-binding enzyme 79 500 IPR000873 -
Viun10g02655 614 SUPERFAMILY Acetyl-CoA synthetase-like 56 609 - -
Viun10g02655 614 FunFam Acyl-CoA synthetase family member 3 72 494 - -
Viun10g02655 614 CDD MCS 81 604 - -
Viun10g02655 614 Gene3D - 68 494 IPR042099 -
Viun10g02655 614 Gene3D - 498 614 IPR045851 -
Viun10g02655 614 PANTHER ACYL-COA SYNTHETASE 62 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02655 Viun-Chr10 39975408 39981877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02655 232 606 Monolignol Biosynthesis Gene Families AT4G19010 28.941 1.53e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02655 K18660 - gmx:100813324 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02655 10 39975408 39981877 Viun10g02655 10 39975408 39981877 ECH