Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02647 ATGATGGCTGGAAACCCTAACTGGTGGACTACGCATCCACCATCATCTTTCATCCCAAACCAGTATCTTCTTGGATCTTCTTCAATACCCTTCAATTCTTCCACACAAAACCCTGATCAACCCCCTCACTCATTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAGGAGGAGAGAGTGGCATTCAGTCATTTTCAATCAAAAAAATTGGATGAATGGAATGAACACATGCTTAATCCATCTCCCATAAATCCTATGGTTGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGTAGCTTCTTTCACCAGGGACATGATCAGGAATTTCAGGTTTCTGGAGCACCTTGGTCACACATGGTGCCAGTTTCTTCTTCTCCTAGGTCTAGTGTTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTATAACAAGGAAGATCATAGGAAGAACCAACTACCACCAGATCACACATCCGAGTGTAATAATAATACCACAGCAACTGCTGGAGTTTACAAGAAGACTAAGAGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGAGATAGAATAACAGCTCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTGAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGGAAAAGATAAGGCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGAAGTGGATTTTAA 972 0.428 MMAGNPNWWTTHPPSSFIPNQYLLGSSSIPFNSSTQNPDQPPHSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNPSPINPMVDVIKQEVSQSGSFFHQGHDQEFQVSGAPWSHMVPVSSSPRSSVVASFSSNNLLDFTYNKEDHRKNQLPPDHTSECNNNTTATAGVYKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDGKDKAKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02647 323 Gene3D - 188 244 IPR036638 GO:0046983
Viun10g02647 323 FunFam Transcription factor bHLH123 family 188 251 - -
Viun10g02647 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 239 IPR036638 GO:0046983
Viun10g02647 323 CDD bHLH_AtbHLH_like 188 235 IPR045239 -
Viun10g02647 323 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 305 - -
Viun10g02647 323 MobiDBLite consensus disorder prediction 242 287 - -
Viun10g02647 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02647 Viun-Chr10 39943410 39946561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02647 166 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 51.064 2.88e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02647 - - gmx:100802121 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02647 10 39943410 39946561 Viun10g02647 10 39943410 39946561 ECH