Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02646 ATGATGGCTGGAAACCCTAACTGGTGGACTACGCATCCACCATCATCTTTCATCCCAAACCAGTATCTTCTTGGATCTTCTTCAATACCCTTCAATTCTTCCACACAAAACCCTGATCAACCCCCTCACTCATTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAGGAGGAGAGAGTGGCATTCAGTCATTTTCAATCAAAAAAATTGGATGAATGGAATGAACACATGCTTAATCCATCTCCCATAAATCCTATGGTTGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGTAGCTTCTTTCACCAGGGACATGATCAGGAATTTCAGGTTTCTGGAGCACCTTGGTCACACATGGTGCCAGTTTCTTCTTCTCCTAGGTCTAGTGTTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTATAACAAGGAAGATCATAGGAAGAACCAACTACCACCAGATCACACATCCGAGTGTAATAATAATACCACAGCAACTGCTGGAGTTTACAAGAAGACTAAGAGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGAGATAGAATAACAGCTCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTGAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTCAACAGGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGGAAAAGATAAGGCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGAAGTGGATTTTAA 978 0.4284 MMAGNPNWWTTHPPSSFIPNQYLLGSSSIPFNSSTQNPDQPPHSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNPSPINPMVDVIKQEVSQSGSFFHQGHDQEFQVSGAPWSHMVPVSSSPRSSVVASFSSNNLLDFTYNKEDHRKNQLPPDHTSECNNNTTATAGVYKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSQQVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDGKDKAKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02646 325 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 307 - -
Viun10g02646 325 MobiDBLite consensus disorder prediction 242 289 - -
Viun10g02646 325 MobiDBLite consensus disorder prediction 242 258 - -
Viun10g02646 325 FunFam Transcription factor bHLH123 family 188 251 - -
Viun10g02646 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 239 IPR036638 GO:0046983
Viun10g02646 325 CDD bHLH_AtbHLH_like 188 235 IPR045239 -
Viun10g02646 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Viun10g02646 325 Gene3D - 188 246 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02646 Viun-Chr10 39943408 39946561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02646 166 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 50.350 2.70e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02646 - - gmx:100802121 567.77