Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02624 ATGCCGGTGTTGCGTAACGGAGCGAACAGGGGTCGGGGAGCAGCGAAACAACAGCGGCTGCAGAATCCAGTGGTTGAAGGAGAGGCGATTGCGACGAGGACCCGGAGGCGACGTGCGGCGGCAGCGGCGGCAGCAGTGCCGAAGGTTAACCACAATAACGAAAATAAGCCCAAACAACCACAACAGCACCCACCACCAGAGCAGGTGGTGGTGGTAAATGAACACGTAGTTGTTGCTGCGAAGGAAGAAGAGAATCGGGGATTGGGGAAAGGTGTTGGTGCCGCTGGAGCTGGAGCGGGGAAGGAAGAGGTAGGCGAGAAAGAGATGGTTGGACATGACAGCGGAGGTCGGAGCAATGACAAGGCCAATGCAGGTGGTGAAGATGATGCCAATACTCCTGAAATTCCTCAGAAGATCCAAGTAGGTAATTCCCCTTATTATAAAGTAGAAAGAAAACTTGGCAAGGGTGGATTTGGTCAGGTATATGTTGGACGACGCTGTGGTGGAAATTTGAATGAGAGAACTGGACCTGGGGCTTTAGAGGTTGCATTAAAACTTGAGCATAGAACTAGTAAAGGTTGTACCTATGGACCACCCTACGAGTGGCAAGTGTACAACACTCTTGGTGGCAGTCATGGTGTCCCACAAGTACACTACAAGGGCAGGCAGGGAGACTACTATGTCATGGTTATGGATATATTGGGACCTAGTCTGTGGGATGTTTGGAATAATAGTAACTCTCATGCCATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGATATGTGCACGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCCGGGACGTCTGATGAGAAAAAATTGTTTCTTGTAGATCTTGGATTAGCAACTAAGTGGAGGGATAGTACAACAGGCTCACATGTTGAATATGATCAAAGACCAGATGTTTTTAGAGGCACTGTCCGCTATGCTAGTGTTCATGCACATTTAGGGAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACATTGATTTTTCTTCTCCGAGGTCGCCTTCCTTGGCAGGGATTCCAGGGAGAAAACAAAGGTTTTCTGGTTTGCAAGAAGAAGATGGGAACATCTCCAGAGATTATTTGCTGCTTTTGTCCCCTACCTTTTAAGCATTTTCTTGAACATGTTGTGAACTTAAAGTTTGATGAAGAACCAAATTATGCAAAATATATTTCTCTATTTGATGGGATTGTTGGTCCTAACCCAGATATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGCCATAAGAGAGGACGGTTAGCGATGGAAGAAGAGGACGATGACCAGCCAAAAAAGAAGACTCGTATTGGTTTGCCAGCATCACAGTGGATAAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGATATCACTACAATGTATCAGATGTAAGGTTATCCCAGCATATTGAGAAAGGAAATGAGGATGGCTTATATATTAGCAGTGTTGCTTCATGTCAAAGCGTATGGGCATTAATCATGGATGCAGGGACAGGTTTCGCTGGCCAAGTTTACGAACTCTCACCCTTCTTTCTCCATAAGGAATGGATCGTGGAGCAATGGGAACTAGGTTACTACATCAGCGCAATTGCTGGAGCTGTAAATGGGAGCTCGCTAGTAGTAATGTCCAAGGGTACACAGTTTGTGCAGCAATCATACAAAGTCAGTGATTCATTTCCTTTCAAGTGGATTAACAAAAAGTGGAGGGAGGGATTTTACGTGACTTCAATGGCCACCTCAGGGCCCAGATGGGGAGTGGTCATGTCTCGTGGTGCAGGATATTCAGACCAGGTGATTGAACTAGACTTTCTGTATCCTAGTGAGGGGATTCACAAGCGGTGGGACAGCGGTTACAGAATCACTTCTACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTCAGTGTGCCAAGGAGGAAACCTTTGGATGAAACTCAGGAAACACTTAGAACTTCTGCTTTTCCTAGTACACATGTTAAGGAGAAGTGGGCTAAGAATCTCTACATTGCTTCTATATGCTATGGACGTACAGTTTCTTGA 2136 0.4565 MPVLRNGANRGRGAAKQQRLQNPVVEGEAIATRTRRRRAAAAAAAVPKVNHNNENKPKQPQQHPPPEQVVVVNEHVVVAAKEEENRGLGKGVGAAGAGAGKEEVGEKEMVGHDSGGRSNDKANAGGEDDANTPEIPQKIQVGNSPYYKVERKLGKGGFGQVYVGRRCGGNLNERTGPGALEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDILGPSLWDVWNNSNSHAMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTSDEKKLFLVDLGLATKWRDSTTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPEIICCFCPLPFKHFLEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDDQPKKKTRIGLPASQWISVYNARRPMKQRYHYNVSDVRLSQHIEKGNEDGLYISSVASCQSVWALIMDAGTGFAGQVYELSPFFLHKEWIVEQWELGYYISAIAGAVNGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTSMATSGPRWGVVMSRGAGYSDQVIELDFLYPSEGIHKRWDSGYRITSTAATWDQAAFVLSVPRRKPLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02624 711 Gene3D Transferase(Phosphotransferase) domain 1 113 468 - -
Viun10g02624 711 Pfam Protein kinase domain 147 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02624 711 MobiDBLite consensus disorder prediction 101 115 - -
Viun10g02624 711 ProSitePatterns Protein kinases ATP-binding region signature. 153 185 IPR017441 GO:0005524
Viun10g02624 711 ProSiteProfiles Protein kinase domain profile. 147 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02624 711 FunFam casein kinase 1-like protein HD16 119 467 - -
Viun10g02624 711 MobiDBLite consensus disorder prediction 1 68 - -
Viun10g02624 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Viun10g02624 711 PANTHER CASEIN KINASE-RELATED 145 679 - -
Viun10g02624 711 MobiDBLite consensus disorder prediction 84 138 - -
Viun10g02624 711 SMART serkin_6 147 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02624 711 SUPERFAMILY Protein kinase-like (PK-like) 147 427 IPR011009 -
Viun10g02624 711 CDD STKc_CK1 147 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02624 Viun-Chr10 39792883 39800007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02624 147 381 AGC Kinase Gene Family AT3G08730 23.207 4.64e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Viun10g02624 Pkinase 1.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02624 - - gmx:100799630 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02624 10 39792883 39800007 Viun10g02624 10 39792883 39800007 ECH