Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02592 ATGGAGAGAGAGAATAAGAGAAAGGGTATAATGAACCACTTCACGCGTTCACATTTAATAGCCGTGCCTAACTCCCATCCTCCTCCTTCAATAGGTGTCATTTTCGGTTGTCATATAAGTTCTCCATTCTCTGCTGCACTCACTGCACCCAAAACCATCATGATGAACATTGCAGCACTTCTTCAACTCTTTGCTTTTTCCTTCCTCACTTGTGTGTATGCACAAGACACCACCACTCTTGTGCCTGCCATACTAACATTTGGTGATTCTGCTGTTGATGTAGGGAATAATGACTATCTTCCCACAATTTATAAGGCTAATTACCCTCCCTATGGGAGGGACTTTGTTAATCACCAACCAACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATCACTGCTGAGACGTTGGGTTTTAAGACCTATGCTCCTGCATATCTTAGCCCACAGGCATCAGGGAAAAACCTTCTTAATGGAGCAAACTTTGCTTCTGCTGCATCTGGTTATGATGAAAATGCTGCTATTTTGAATCATGCAATTCCATTGTCCCAACAGTTGAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGAAGTCAAAAAGCAGCCTCAATTATCAAAGATGCATTGTACGTGCTCAGTGCTGGTAGCAGCGACTTTGTGCAAAACTATTACGTCAATCCTTGGATCAACAAAGTATACACACCTGACCAGTATGGCTCCTACTTGGTTGGTTCATTCAACAGTTTTGTTAAGGACTTGTATAGATTGGGAGCAAGAAGACTTGGAGTGACTTCACTCCCACCACTGGGGTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACTCTGATGCCCAAGCATTTAACAAGAAGATCAATTCAGCTGCAGCAAATCTTCAAAAGCAACTTCCGGGTCTCAAGATTGCTGTTTTTGACATTTACAAGCCCCTCAATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTTGTGGAGGCAAACAGAGGTTGCTGTGGAACCGGGACTGTGGAGACAACATCCTTGTTGTGTAATCAAAAATCACCTGGAACTTGTTCTAATGCCACCCAGTATGTGTTCTGGGATAGTGTCCATCCTTCAGAGGCAGCTAACCAAGTTCTTGCTGATGCATTAATTCTCCAAGGCATAAGTCTTGTCACATAA 1221 0.4308 MERENKRKGIMNHFTRSHLIAVPNSHPPPSIGVIFGCHISSPFSAALTAPKTIMMNIAALLQLFAFSFLTCVYAQDTTTLVPAILTFGDSAVDVGNNDYLPTIYKANYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKTYAPAYLSPQASGKNLLNGANFASAASGYDENAAILNHAIPLSQQLSYFKEYQGKLAKVAGSQKAASIIKDALYVLSAGSSDFVQNYYVNPWINKVYTPDQYGSYLVGSFNSFVKDLYRLGARRLGVTSLPPLGCLPAARTLFGFHENGCVSRINSDAQAFNKKINSAAANLQKQLPGLKIAVFDIYKPLNDLVQSPSKFGFVEANRGCCGTGTVETTSLLCNQKSPGTCSNATQYVFWDSVHPSEAANQVLADALILQGISLVT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02592 406 Gene3D SGNH hydrolase 73 401 IPR036514 -
Viun10g02592 406 Pfam GDSL-like Lipase/Acylhydrolase 84 396 IPR001087 GO:0016788
Viun10g02592 406 SUPERFAMILY SGNH hydrolase 84 397 - -
Viun10g02592 406 FunFam GDSL esterase/lipase APG 73 402 - -
Viun10g02592 406 CDD SGNH_plant_lipase_like 82 398 IPR035669 -
Viun10g02592 406 PANTHER GDSL ESTERASE/LIPASE EXL3 67 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02592 Viun-Chr10 39606991 39608887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02592 57 398 Pollen Coat Proteome AT1G75910 34.493 4.24e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02592 - - vun:114167332 818.535