Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02584 ATGGTTAAACATTTTGTTCTGGCAATCTATCTCCTCTGTTTCACTCTTGAAACTCTTGTTCATGCCCAAGATCAATCTGGATTCATCAGCATCGATTGTGGAGTGGTGGATGAAGAAAGCTACAAAGATGAAAGCACCAGCATTGAATACAGTTCAGATGGAAATGCCACAGACAGTGGTATAAACAGGAGCATATCATCTGAATACATGGTGAAATCCTTAGAGAGAAGGTTTTGGAATGTTAGAAGCTTCCCAGAAGGCACAAGAAACTGCTATACCCTTTATCTTCCTCGAATGAATAGCAACGTGCGTCTGATTAGGGCAAGGTTCATGTATGGAAACTATGATGGAAAAGATTCCCTCCCCAAGTTTGATTTGTACCTTGGACCCAACTTCTGGGACTCTGTGGAGTTTCAAAATGCTTCCACTGTCACAACCAAGGAAATTGTTCATGTTGCAACATCAGATTATATTCAAACTTGCCTTGTTAACACAAACGAAGGCACACCCTTCATATCAACCTTGGAGATCAGAGTTCTAAATGATGCTAACTATGTTTCTGACTCAATACAGCTTCTGCAAAGATTTGATGTAGCCTTACAAGAGGGTCAAATTGTCAGGTATCCTGATGATATTTATGATCGAATTTGGTCACCCTACAATCCAGAGGGCTGGAAAAAGATTAGTACATCCCTTGCAGTACCTAATGGAGGACTTTTCTCTTATGGGGTACCCTCCATTGTCCTGAAAACAGCAGCAACACCAGAAAATGCGAGTGATAATTTGGAATTTTCGTATCAACTAAGCAATAATGGTGCAGTCAAGTTTTATGTATACATGTACTTTGCTGAGATAGAGAATCTTGCAGCTGATGTAACCAGAGAATTCGATGTTTATGTGAATGGGAGGCTCCTTCAGAATAATGTCAGTTTACCTTTCCTAACTCGCGTTACTTTGATCTCTGAAACCCCACCTCAAACCATGTTACAAATTTGGATCAACAGAACAAATAAAGCAACCATGGCCCCTATACTGAATGGCATCGAGGTTTATGAAGGGAAAACCCTAGATTTACCAGAGACCCATCAAGATGATGTTGGTGCCATCATGCAAATAAAGTCAACGTACGGCATCAAGCAAATGTGGCAAGGAGATCCTTGTAACCCTAAAACTCACCTGTGGAAGGGTGTAAACTGCAGCTACAATGGACACAACCAACCTAGAATCACATCTTTGAACCTGTCATCAAGTGGGTTGACCGGGAACATAGTTGTGGCCATTTCCAATCTGAAATTGATACAATATTTGGATTTGTCCAATAACAGTTTAACTGGTTCTGTGCCTGATTCATTATCTGAACTGGAGTTCCTGAAGATTTTAAATGTTGGAGGTAATAAACTATCTGGCTCAATTCCTTCAAAACTCTCTGAGAGAACAAGGAACGGGTCGCTGATTATATTAAGTCTTGGTGGAAATCCCGATCTCTGCTTCTCAAGTTCTTGTCACAAGAGGAATAGGATAGTAATTCCGTTGCTCGTAACAGCTCTTGCAGCTCTCGTTCTTTCTGCAGCACTCTCATTTATTTGTAGAAGAAGACTTCAAGTTGTGATGAATAGGCACAAGGTGAGTTTTTTGAACAACACTGTGAGTGTGGATTCAAAGAAACAAGAGTTCAGCTACTCAGAGGTTCAAAGTATTACCAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACCATGGTTGCATAGGTGAAACACAAGTAGCAGTCAAGATGCTCTCTGCTTCAACTCAAGGGTATCAGCAATTTCAGACAGAGGCAAATATTCTCACAAGAGTGCACCACAAATGCTTGACTCCACTTATTGGATATTGCAATGAAGGCAATAGAACAGCACTCATCTATGAATACATGACCAACGGAGACTTATCTGACAAACTATCTGGTGAAAGTCAAACTTTCTTAGATTGGAAACAAAGACTTCAAATTGCACTGGATACAGCAATAGGCTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTGTTCACAGAGATGTTAAGACCAGAAACATTTTACTAAATGAAAACCTACGCGCTAAAATTTCTGATTTTGGATTGTCAAGGATGTTTTCAGATGAAGGTGACACCCATGTATCAACAGTTATTGCAGGCACCCCAGGATACCTTGACCCTGAATACTACATAACAAACAGGTTGAATGAAAAAAGTGACGTGTTTAGTTTTGGAGTTGTTCTTCTAGAGATAATGACAGGGAGAAGAGCCATATCGAAAAGCAGTGAGAAAAGTCACATAATTAAATGGGTGAGTTCCATTGTGGAGGGTGATGGTGAAATTGATGGTGTTATGGATGGAAGGTTAGAAGGAGATTATGACAGTGAGGGTGCAAAGAAAGTAATAGATTTAGCAATGGTTTGTGTGGCTCCAAGTTCTGTTAATAGGCCAACAATGAGTGAAGTGGCCATGGAACTAAAACTATGTTTTCCCATTGGAGAACTTAGGAGTGCTTCCACTGGATCCATTGAAGTTCCCTCCATTAATGAAATCAGTGGATTTAGTTCGTTAGAAAGGTAA 2607 0.4028 MVKHFVLAIYLLCFTLETLVHAQDQSGFISIDCGVVDEESYKDESTSIEYSSDGNATDSGINRSISSEYMVKSLERRFWNVRSFPEGTRNCYTLYLPRMNSNVRLIRARFMYGNYDGKDSLPKFDLYLGPNFWDSVEFQNASTVTTKEIVHVATSDYIQTCLVNTNEGTPFISTLEIRVLNDANYVSDSIQLLQRFDVALQEGQIVRYPDDIYDRIWSPYNPEGWKKISTSLAVPNGGLFSYGVPSIVLKTAATPENASDNLEFSYQLSNNGAVKFYVYMYFAEIENLAADVTREFDVYVNGRLLQNNVSLPFLTRVTLISETPPQTMLQIWINRTNKATMAPILNGIEVYEGKTLDLPETHQDDVGAIMQIKSTYGIKQMWQGDPCNPKTHLWKGVNCSYNGHNQPRITSLNLSSSGLTGNIVVAISNLKLIQYLDLSNNSLTGSVPDSLSELEFLKILNVGGNKLSGSIPSKLSERTRNGSLIILSLGGNPDLCFSSSCHKRNRIVIPLLVTALAALVLSAALSFICRRRLQVVMNRHKVSFLNNTVSVDSKKQEFSYSEVQSITNNFERVVGKGGFGTVYHGCIGETQVAVKMLSASTQGYQQFQTEANILTRVHHKCLTPLIGYCNEGNRTALIYEYMTNGDLSDKLSGESQTFLDWKQRLQIALDTAIGLEYLHNGCKPPIVHRDVKTRNILLNENLRAKISDFGLSRMFSDEGDTHVSTVIAGTPGYLDPEYYITNRLNEKSDVFSFGVVLLEIMTGRRAISKSSEKSHIIKWVSSIVEGDGEIDGVMDGRLEGDYDSEGAKKVIDLAMVCVAPSSVNRPTMSEVAMELKLCFPIGELRSASTGSIEVPSINEISGFSSLER 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02584 868 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 642 846 - -
Viun10g02584 868 SUPERFAMILY Protein kinase-like (PK-like) 553 835 IPR011009 -
Viun10g02584 868 Pfam Malectin-like domain 31 352 IPR024788 -
Viun10g02584 868 PANTHER OS07G0107800 PROTEIN-RELATED 29 839 - -
Viun10g02584 868 SUPERFAMILY L domain-like 363 501 - -
Viun10g02584 868 ProSitePatterns Protein kinases ATP-binding region signature. 574 595 IPR017441 GO:0005524
Viun10g02584 868 Gene3D Phosphorylase Kinase; domain 1 549 641 - -
Viun10g02584 868 Gene3D Ribonuclease Inhibitor 367 486 IPR032675 -
Viun10g02584 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Viun10g02584 868 Pfam Leucine rich repeat 407 467 IPR001611 GO:0005515
Viun10g02584 868 FunFam Leucine-rich repeat receptor-like kinase 364 497 - -
Viun10g02584 868 Pfam Protein tyrosine and serine/threonine kinase 570 780 IPR001245 GO:0004672|GO:0006468
Viun10g02584 868 Gene3D Transferase(Phosphotransferase) domain 1 642 840 - -
Viun10g02584 868 ProSiteProfiles Protein kinase domain profile. 568 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02584 868 CDD STKc_IRAK 574 836 - -
Viun10g02584 868 Gene3D - 203 355 - -
Viun10g02584 868 SMART serkin_6 568 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02584 Viun-Chr10 39550809 39560701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02584 6 836 Receptor kinase-like Gene Family AT2G19210 48.524 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun10g02584 Malectin_like 5.5e-101 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02584 - - gmx:102663143 909.057