Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02544 ATGGCTTCAAGCTCTGGTGCAGAAGAGGCGTCACTGGACGACGATTACGCTTCCTTGATTGCAACCACCGATGTGGAGCTTCTCAAGCGAGCATGGCGTAACGAGAAGGCGGCGCCGGAGATTCTCCGATACGAATCCCATTTGATTTCCCGCGTCAAGGAACAGATTGAACTCATGGAGGAAACAGTGGAGGAGAAATCCAGTGTCGGGAATGATCCTCTCTCAGTGTCTCTGTATCAGATGGACTTGGACAGAACCCTCTTTCTGTTGAGATCCTATCTCCGCATCCGCATCCAGAAGATTGAAAAATACATGTTTCACATCCTAAAAACCGAAGAACTTTGGAACAGGCTATCCAAAGACGAGAGAGATTTCGCCAGAACGTGTACAAGTGACCTAAACCAACATCTAGAGGAGACTGTTCTGTCGAAGCTGCCAGAAAATTATCAGTCTGTGCTTAAGCAATCTGTAATAAGTGAAGAGGAGGACATGGTGCCAGAACCACAACTAGATACATTTGTTTTATGTAGAAGTAAAGAGTATCTCACGGGCATTCAACTCGAAGATGGACCTGCTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTCCTCCATTTCATATGTTACAGATCAATAAAAGCACTTGTGGAGAGCGGTAAAATTGATCTACTCTGA 681 0.4596 MASSSGAEEASLDDDYASLIATTDVELLKRAWRNEKAAPEILRYESHLISRVKEQIELMEETVEEKSSVGNDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHILKTEELWNRLSKDERDFARTCTSDLNQHLEETVLSKLPENYQSVLKQSVISEEEDMVPEPQLDTFVLCRSKEYLTGIQLEDGPADDRSKLFEMEPGVLHFICYRSIKALVESGKIDLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02544 226 Pfam GINS complex protein 54 123 IPR021151 -
Viun10g02544 226 Gene3D - 10 216 - -
Viun10g02544 226 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 226 IPR031633 -
Viun10g02544 226 PIRSF GINS_Sld5 1 226 IPR008591 GO:0006261
Viun10g02544 226 SUPERFAMILY PriA/YqbF domain 170 226 - -
Viun10g02544 226 Coils Coil 49 69 - -
Viun10g02544 226 CDD GINS_B_Sld5 168 226 IPR031633 -
Viun10g02544 226 FunFam DNA replication complex GINS protein SLD5 9 216 - -
Viun10g02544 226 SUPERFAMILY GINS helical bundle-like 21 153 IPR036224 -
Viun10g02544 226 PANTHER SLD5 PROTEIN 8 226 IPR008591 GO:0006261
Viun10g02544 226 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02544 1 173 Core DNA Replication Machinery Family AT5G49010 64.162 2.61e-69 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02544 K10735 - gmx:100784291 375.555