Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02538 ATGGACAATATTTTGATTGTGTCTGTGACAGTGTTTCTCTTATGCACTGTGATCCTCCTCTACAGGAACAGGCTCAAATCAAAATATAGAAATAAACTTCCATTAGGAACTCTTGGATGGCCTTTTATCGGTGAAACTCTTGAGTTTGTTTCTTGTGCTTATTCTGATCGCCCTGAGAGCTTCATGGACAAGCGACGCAGCATGTATGGCAAGGTGTTCAAGTCACACATATTTGGAAGCCCCACAATAGTTTCCACGGATGCTGATGTGAACAAGTTTATACTGCAAAGTGATGCAAAAGTTTTTGTTCCTTCTTATCCCAAGTCTCTTACTCAGTTGATGGGAGAGTCTTCTATTTTGCTCATCAATGGAAGCCTTCAGAGGAGAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAAAAGTATGTCACAGAATCAATGTCTAGTTGGAAAGAAGATAGCCCCGTATACATACAAGATGAAACAAAAAAGATTGCTTTTCATGTACTAGTCAAGGCATTGATTAGTTTGGATCCAGGAGAAGAAATGGAACTTCTGAAGAAACATTTTCAGGAATTTATCTCTGGCCTCATGTCTCTACCAATAAATCTACCAGGAACTAAACTTTATCAATCTTTGCAGGCAAAGAAGAAAATGGTGAAATTAGTGCGGAGAATTATCCTAGCTAAAAGAAATAGTGGCATTTGCAGAGTTCCAAAGGATGTGGTGGATGTGCTTCTGAATGATGCAAGTGAAAAATTGACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGGGAAGATTCAGTGCCAGTTCTTATGACTCTAGCTACAAAATATCTATCAGAATGCCCAGCAGCTTTGCAGCAATTGACGGAGGAAAATATGAAGCTTAAGAAACTTCAAGATCAGGTTGGAGAGTCCTTGTGTTGGAGTGATTACCTATCATTGCCATTTACTCAAACAGTCATCACTGAAACTCTGAGAATGGGAAATATCATAATTGGAGTAATGAGAAAGGCCTTGAGAGATTTTGAAATAAAAGGGAACTTAATACCAAAAGGGTGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGACAGAAACTATGAATGTCCATATCAGTTCAATCCATGGAGGTGGCAAGACAAAGATATGAGCAGTTGCAATTTCACTCCTTTTGGAGGGGGACAAAGGCTTTGTCCAGGCCTTGACTTGGCCAGGCTTGAAGCTTCCATCTTTCTACACCACTTTGTCACTCAATTCAGATGGCATGCTGAAGCAGATGCAATAGTGAACTTTCCCACAGTAAGAATGAAAAGGAGGATGCCTGTGATGGTAAGGAGAGTGGAATCTTAA 1413 0.3949 MDNILIVSVTVFLLCTVILLYRNRLKSKYRNKLPLGTLGWPFIGETLEFVSCAYSDRPESFMDKRRSMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTQLMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVTESMSSWKEDSPVYIQDETKKIAFHVLVKALISLDPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRRIILAKRNSGICRVPKDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENMKLKKLQDQVGESLCWSDYLSLPFTQTVITETLRMGNIIIGVMRKALRDFEIKGNLIPKGWCVFANFRSVHLDDRNYECPYQFNPWRWQDKDMSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWHAEADAIVNFPTVRMKRRMPVMVRRVES 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02538 470 CDD CYP90-like 65 467 - -
Viun10g02538 470 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 23 468 - -
Viun10g02538 470 Gene3D Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Viun10g02538 470 Pfam Cytochrome P450 34 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 SUPERFAMILY Cytochrome P450 28 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g02538 470 PANTHER CYTOCHROME P450 26 31 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02538 Viun-Chr10 39267744 39272317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02538 32 441 Cytochrome P450 AT3G13730 68.675 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02538 K12638 - gmx:100797868 845.114